Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02168 ATGGCCTCCCACTACGAACTCCAACTGCAGCTCATCTCTGCGCGTGGCTTAAAAAACGTGAACTGGCGCCACGGCGCGAACCGCCCATTCGCCGTCGTTTGGGTGGACCCTAAGAACAAGTGCTCCACGAGCGTCGACGAGGACGGCGACACCGAAGCCACTTGGGACCAAACCCTAGTTATTCCTCTTCCTCCTGAGCCTCTCGAGAATCTGACGCTCCATGTCGACGCAGTTCACGCCGGCTCCGAGGAGGACACCGAGCCTCTTATTGGCTCGGCGCGGCTCAAGCTCGTTGAAGTCCTTGAAGAAGTTGGAATTGGAGCGCGCGTGAGCCGCACTCTCTCGCTGAAGCGCCCTTCGGGAAGACCCCAAGGGAAAGTGGACGTTAATGTCGTTATGAGAGAAAGTGGCGGCTACCGTACGCAGGATGCGTATTATGCGCCTCCTATAGGTGTAAGGGATTATTCCCCTGTGCCGCATGGCTATGGGTACCCGTCTCATCAGGATAATAATACTTATTACAATTCTGCGATCCAAACGACGTCGTATGGACGAGGGAGTGAGTACGCGCCGCAGGAAGATAAGAAGAGTAAGTTTGGGGGGATGGGGACAGGATTAGCTGTGGGCGCGGTCGCGGGGGGTTTAGGTGGAATCGCGCTAGTGGAGGGTGCTGATTTCCTGGAGGAGAAGATTGCAGATGACGTGGCAGATAATATTGAGGATGATCTTGGATATGATGAAGATGATATCTAG 753 0.5485 MASHYELQLQLISARGLKNVNWRHGANRPFAVVWVDPKNKCSTSVDEDGDTEATWDQTLVIPLPPEPLENLTLHVDAVHAGSEEDTEPLIGSARLKLVEVLEEVGIGARVSRTLSLKRPSGRPQGKVDVNVVMRESGGYRTQDAYYAPPIGVRDYSPVPHGYGYPSHQDNNTYYNSAIQTTSYGRGSEYAPQEDKKSKFGGMGTGLAVGAVAGGLGGIALVEGADFLEEKIADDVADNIEDDLGYDEDDI 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02168 250 ProSiteProfiles C2 domain profile. 1 114 IPR000008 -
Vimu8g02168 250 Pfam C2 domain 6 101 IPR000008 -
Vimu8g02168 250 Gene3D C2 domain 1 134 IPR035892 -
Vimu8g02168 250 CDD C2_SRC2_like 6 129 IPR044750 GO:0006952
Vimu8g02168 250 PANTHER INGRESSION PROTEIN FIC1 7 210 - -
Vimu8g02168 250 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 134 IPR035892 -
Vimu8g02168 250 SMART C2_3c 6 109 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02168 Vimu-Chr8 28069945 28071611 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02168 - - vra:106766434 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02168 8 28069945 28071611 Vimu8g02168 8 28069945 28071611 ECH