Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02164 ATGGGTTCTCGCTACGAGGTGGAAGTGAAACTCTCATCGGCGCGCGGATTGAAGAACGTGAACTGGCGCAACGGCGCAAACCGTCCGTACGTCGTCGTTTGGGTGGACCCCAGCAACAAGCTCTCCACCCACGTGGACGAGAACGGCGACACCGATGCCAATTGGGATCAGACGCTCGTAGTTCCGTTACCGCCGAAGCCCCTCGAAGATCAAACGCTCTACATCGACGTCGTTCACGCCGTCAAGGAGGAAGAAGACACCAAGCCGCTCATCGGCTCGGCTCGGCTCAAGCTCTCTGAGATTCTCGCCGACGCCGGAATGGGCGAGCGCGTGGGCCGCACTCTCACGCTCAAGCGTCCATCTGGCAGACCACAAGGGAAGGTCGAGGTTAGCGTGACCATCAGAGAGCCCCGCTATCCCCCACCCGGTGGTTACCCCGCGCCGGCTTACGGTGCTCCGCCACAAGACTCCTATTACTCCGCGGCGCCGCCCAGTGGGTATCCTTACAATGCGCCTACGCAGGGTTATGGCGCGGTCGCTGGGGTTCTAGGTGGAGTCGCGCTTGTGGAGGGTGCTGAGTATCTGGAAGATAAGATTGCCGAAGATGCTGCGGAGAAGGTTGAGGAAGATCTTGGTTATGATGGTGATGACTTCTAG 657 0.5967 MGSRYEVEVKLSSARGLKNVNWRNGANRPYVVVWVDPSNKLSTHVDENGDTDANWDQTLVVPLPPKPLEDQTLYIDVVHAVKEEEDTKPLIGSARLKLSEILADAGMGERVGRTLTLKRPSGRPQGKVEVSVTIREPRYPPPGGYPAPAYGAPPQDSYYSAAPPSGYPYNAPTQGYGAVAGVLGGVALVEGAEYLEDKIAEDAAEKVEEDLGYDGDDF 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02164 218 Pfam C2 domain 7 106 IPR000008 -
Vimu8g02164 218 ProSiteProfiles C2 domain profile. 1 112 IPR000008 -
Vimu8g02164 218 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 136 IPR035892 -
Vimu8g02164 218 SMART C2_3c 6 110 IPR000008 -
Vimu8g02164 218 CDD C2_SRC2_like 6 130 IPR044750 GO:0006952
Vimu8g02164 218 Gene3D C2 domain 3 141 IPR035892 -
Vimu8g02164 218 PANTHER INGRESSION PROTEIN FIC1 7 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02164 Vimu-Chr8 28055892 28056782 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02164 - - gmx:100817630 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02164 8 28055892 28056782 Vimu8g02164 8 28055892 28056782 ECH