Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02140 ATGTGGCCATTCAAAAGAAGAGGAGGTTCTGGGTTTTCATGGTCTTCCACTGCAGAAGAAGTTACTCTCGGAATAGATGCCACTGCTCTTACTGCTATTGTTACTGACATTTTTATTGAAGCTGTTGTCTTTGTTGAAAGAAGAACAGGTGCATCAAGCGGTATAGGTGCTGAGACAGCTCGTGTTCTTGCATTGCGTGGTGTGCATGTGATAATGGGAGTGATTGATATGATGGATGCTTTTAATGTTAAGGATTCAATACTTAAACAAATTCCCACTGCTAAAGTTGATGTCATGAAGTTGGATCTAAGTTCAATGGCTTCTGTTCATCATTTTGCTGATGAGTTTAATTCAACTTCTCTTCCATTGAATATTTTGATGTCATTTTCTTCTAACAAATCTGTTGTTGGAAAATATGAAGAAAGCAGCAAGAGAAACTACAGCAATTGGCGTGCCTATGGACAATCAAAGCTTGCAAACATTTTACATGCCAATGAACTTGCAAGGCGTTTCAAGGAAGATGGAGTAGATATTACTGCGAATTCTCTTCATCCAGGATTTATTACCAACACAAATATACATCTTCAGAATCGATTTCTCACAGGTCTAGTGAATATTCTAAGTTCATTTGTACCTCGTTACATAGAGCGATTTGTGTTGAAAAATGTGGAGCAAGGAGCATCAACAACATGCTATTTAGCATTGCACCCAGTGAGTGGAATCAATGGAAAGTATTTTGCAGATAATAATGTTTCAGAAACATGTTTGCAGGGAAGGGACATGGATTTGGCTAAGATGCTATGGGATTTTAGCATGAATTTGACCATGAAAAATGAACAGTGA 843 0.3784 MWPFKRRGGSGFSWSSTAEEVTLGIDATALTAIVTDIFIEAVVFVERRTGASSGIGAETARVLALRGVHVIMGVIDMMDAFNVKDSILKQIPTAKVDVMKLDLSSMASVHHFADEFNSTSLPLNILMSFSSNKSVVGKYEESSKRNYSNWRAYGQSKLANILHANELARRFKEDGVDITANSLHPGFITNTNIHLQNRFLTGLVNILSSFVPRYIERFVLKNVEQGASTTCYLALHPVSGINGKYFADNNVSETCLQGRDMDLAKMLWDFSMNLTMKNEQ 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02140 280 PANTHER RETINOL DEHYDROGENASE 137 275 - -
Vimu8g02140 280 Pfam short chain dehydrogenase 49 127 IPR002347 -
Vimu8g02140 280 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 49 247 IPR036291 -
Vimu8g02140 280 Gene3D - 129 278 - -
Vimu8g02140 280 Gene3D - 49 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02140 Vimu-Chr8 27769871 27774787 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02140 - - gmx:100776100 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02140 8 27769871 27774787 Vimu8g02140 8 27769871 27774787 ECH