Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02092 ATGAAAAAGAACTCGCTTCTTTGTATTAGCTTTTGTCTAAAAATGATTTCCTCCTTCTTTATCCTTATGTTTCTTTATTCGCTTTTTATGTCAACCTTTGGTGTGTGCAGAGAGACAGTGTGTATTGGAAGTGAGAGAGAGATACTGTTGAAGTTGAAGCATAATCTCATTGATCCTTCAAATAGACTTTCTTCTTGGAATGCTTCTCTCTATCCCAATTGTTGCCATTGGTATGGAGTTCTCTGCAACAACGTCACATCTCATGTTGCTGAGCTTCACCTTAGCACTCCATTTCCTTCTTTCAATGAGAGCCTAAGTTATGATGAAGCATGGGAAGAGTATAGTAGAAGGGCATTCAGTGGAGAGATAAATCCTTGTTTGGTTGATTTGAAGCATTTGAATTACTTGGATTTCAGCAACAATCTATTTGATTGGAAGCCATTTCCTTCTTTCATTGCAACAATGACTTCCTTAACTCACCTCAACCTTTCTTATGCT 498 0.3755 MKKNSLLCISFCLKMISSFFILMFLYSLFMSTFGVCRETVCIGSEREILLKLKHNLIDPSNRLSSWNASLYPNCCHWYGVLCNNVTSHVAELHLSTPFPSFNESLSYDEAWEEYSRRAFSGEINPCLVDLKHLNYLDFSNNLFDWKPFPSFIATMTSLTHLNLSYA 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02092 166 SUPERFAMILY L domain-like 40 165 - -
Vimu8g02092 166 Gene3D Ribonuclease Inhibitor 41 166 IPR032675 -
Vimu8g02092 166 PANTHER LRR RECEPTOR-LIKE KINASE 41 165 - -
Vimu8g02092 166 Pfam Leucine rich repeat N-terminal domain 44 83 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02092 Vimu-Chr8 27046674 27047236 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g02092 44 164 Receptor kinase-like Gene Family AT1G08590 36.641 4.85e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02092 - - vra:106762523 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02092 8 27046674 27047236 Vimu8g02092 8 27046674 27047236 ECH