Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g02068 ATGCAAGAGGACCGCGGATCGGGGCCTTCTCGTCATTCCAATAAGGACGAAATCCGGTTGCCGGTCATAAAATCTCTGCCACGATCCGTGGTGGTTCTCCTCTTCCCCGCCGTGCTCATCATCGGCGTGTTGGCTTACACGCGTGAGACAGAACCTACACTTTCTGGAATTTCATCTACGAAATCTTCATTAAGCACCACACGTACCTTCAAAATCCCTTTCAGTGTTCAAAGAGAGACTCCATTGAACTGCAATGTATACAACCTCACAAGAACATGCCCAACCAATCAAAACCCAATCAAAGAGGATGATCAGAGCCGTCCATCCGGTGCCACGTGTCCAGACTACTTCCGTTGGATTGAGGAGGACTTGAGACCGTGGGCCTACACAGGCATAACAGAAGAGATGGTGGAGAGGGCAAAGGCAACAGCAAACTTCAAGTTGGTGATATTGAAGGGTAGGGCTTATTTGGAGACCTACCAGAAGTCCTTCCAAACAAGGGATGTCTTTACATTATGGGGCATTTTGCAGTTGTTAAGGAGGTACCCTGGAAAAGTTCCTGATTTGGAACTCATGTTTGATTGTGTGGATTGGCCTGTGGTTTTAGCTAACCAATACAGTGGTTCTGTTTCTCAGCAGCCACCACCATTGTTTCGATACTGTGGAAATGATGATACCTTGGACATTGTCTTCCCTGATTGGTCTTTCTGGGGATGGGCTGAGGTTAATATAAAGCCATGGGAGATTTTGATGGGAGAGTTGAAAGAAGGGAACGAGAGAATACCATGGCTCAACAGAGAGCCTTATGCATACTGGAAAGGTAATCCATCTGTTGCAGAAACCAGACAAGACCTCTTGAAATGCAATGTTTCTCAAAATCAAGATTGGAATGCTCGTTTATATGCTCAGAATTGGAAACGAGAATCAGAAGAAGGGTTTAAGAAATCAGAATTGGCAAGCCAATGCACTCATAGATATAAGGTGTACATTGAAGGTTCTGCTTGGTCAGTGAGTGAAAAATATATCTTGGCATGTGACTCCACCACTCTACTTGTGAAGCCACATTACTATGATTTTTTCTCAAGAGGACTCATACCAGGGCACCACTATTGGCCCATAAAGGAAGATGACAAGTGCAGGTCCATTAAGTTTGCTGTAGATTGGGGGAACAGTCACAATCAAAGGGCACATCAAATTGGAAAGGCAGCAAGTGAATTCATTCGAGAAGAGTTAAAGATGGATTTTGTGTATGATTACATGTTTCATCTTCTGAATGCATATGCTAAACTGTTCACATACAAACCCTCCATTAGTGGTTATGCTACTGAACTGTGTGTGGAGTCAATGGTTTGTGGAGCAGAAGGATTGGAAAAGAAATTTATGATGGAATCATTGGTGAAAGGTCCTGCAGACACCGACCCTTGCACCATGCCTGCCCCTTTTGATCCTCCATCTTTGTACGCACAATTACAGAGAAAGAAAAGTTCAATTCAACAAATTGAATCATGGGAGAGAAGTTACTGGGAGAATCAAAACATAACATCTTAG 1548 0.4373 MQEDRGSGPSRHSNKDEIRLPVIKSLPRSVVVLLFPAVLIIGVLAYTRETEPTLSGISSTKSSLSTTRTFKIPFSVQRETPLNCNVYNLTRTCPTNQNPIKEDDQSRPSGATCPDYFRWIEEDLRPWAYTGITEEMVERAKATANFKLVILKGRAYLETYQKSFQTRDVFTLWGILQLLRRYPGKVPDLELMFDCVDWPVVLANQYSGSVSQQPPPLFRYCGNDDTLDIVFPDWSFWGWAEVNIKPWEILMGELKEGNERIPWLNREPYAYWKGNPSVAETRQDLLKCNVSQNQDWNARLYAQNWKRESEEGFKKSELASQCTHRYKVYIEGSAWSVSEKYILACDSTTLLVKPHYYDFFSRGLIPGHHYWPIKEDDKCRSIKFAVDWGNSHNQRAHQIGKAASEFIREELKMDFVYDYMFHLLNAYAKLFTYKPSISGYATELCVESMVCGAEGLEKKFMMESLVKGPADTDPCTMPAPFDPPSLYAQLQRKKSSIQQIESWERSYWENQNITS 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g02068 515 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 60 509 - -
Vimu8g02068 515 SMART cap10 185 434 IPR006598 -
Vimu8g02068 515 Pfam Glycosyl transferase family 90 111 504 IPR006598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g02068 Vimu-Chr8 26764126 26767716 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g02068 - - gmx:100789969 872.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g02068 8 26764126 26767716 Vimu8g02068 8 26764126 26767716 ECH