Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01980 ATGAATGAAGAGAAAAACAAAATGGATTTCATTCAATTGCTTGGACCTGACATGTCAGTCAAGATTCTGACCCATTTGGACGCCCCTTGTGATATTATTAGGGTTTCTGCTGTTTCTAGTTCTTGGCACCGATTTGTTATTGAACATGGCCTTTGCAAGCAACTTTGCTTGGCAATGTTTCCTGAAATATCTGGTCTTACTCATATGATTGAGTTTGACAACATTATTGAACCACTGGGCAACCCTCATGGAAGTTGTGTAAATTGGGAGTATCTAAAGAGAAACCATAAAGTCTATGCATTCTTGTCCTCTGGTCTTCATCCTGTGAGGAAAAGTTGTATCTCTAAAGCTATTAGTGCATCTAGCACTGATAACTATCCTGAAGAAAGCATTCTACATACGTTGGAGCCTGGTGATAGAACTGAATATACAGCATCATACTGGTCAAGCAAAGGGGAAAACGATCCTTCTGTTCCTGAGACTTTAGTTTACAAGCTTGTTTCAGAAATGTGTCTTGTCACAGAGATTCATGTCCAACCGTTCCAAGCATTTTTTCAGCATGGCTTGCCTATATATTCTGCTAAGGCTGTCCGATTCAGAATGGGATATCCAAGATACCCAATTGAATCGGAGAGTGCTGTAGATAATATAACTGCTAATGAAGTCTTGGGCGATAATCAATTCATATGGACGTGTACTTCACCTGAATTTCCAATGTGTCAAGAAAACAGCTTGCAAAAATTCAAGCTCCCTGAACCTTTTCTGTGCATTGGAGGCATTCTGCTAGTTGAGCTATTGGGTAGAGTTCAAAAACAAGAGATGGATGAATTATTCTACATATGCATCTCCCATGTTCAAGTCATGGGACGGCCACTTTCACCAGCATTTGATGTCAAAGTTCATCATCCATCAGGGAAGTGTACCTTGAAATACCATCCTCCTCCGACAGATCCTCACATATCTTCTTCAACATCTTCGCCGGACTCGAGCAGTTCGTCGCGCCTGCGCATAATAACCTCAAACCTAGTGCAGAGGGGTGTGAGACGTTGGGAGCAAATTCTCTTGGGTGCACTGCTTGGTTCTGGTCCTGTTGTAGTTGATGATTAA 1107 0.4164 MNEEKNKMDFIQLLGPDMSVKILTHLDAPCDIIRVSAVSSSWHRFVIEHGLCKQLCLAMFPEISGLTHMIEFDNIIEPLGNPHGSCVNWEYLKRNHKVYAFLSSGLHPVRKSCISKAISASSTDNYPEESILHTLEPGDRTEYTASYWSSKGENDPSVPETLVYKLVSEMCLVTEIHVQPFQAFFQHGLPIYSAKAVRFRMGYPRYPIESESAVDNITANEVLGDNQFIWTCTSPEFPMCQENSLQKFKLPEPFLCIGGILLVELLGRVQKQEMDELFYICISHVQVMGRPLSPAFDVKVHHPSGKCTLKYHPPPTDPHISSSTSSPDSSSSSRLRIITSNLVQRGVRRWEQILLGALLGSGPVVVDD 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01980 368 MobiDBLite consensus disorder prediction 310 332 - -
Vimu8g01980 368 MobiDBLite consensus disorder prediction 317 332 - -
Vimu8g01980 368 PANTHER F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED 2 355 - -
Vimu8g01980 368 SUPERFAMILY F-box domain 4 71 IPR036047 GO:0005515
Vimu8g01980 368 Gene3D - 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01980 Vimu-Chr8 25652656 25654712 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01980 - - gmx:100786763 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01980 8 25652656 25654712 Vimu8g01980 8 25652656 25654712 ECH