Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01909 ATGGCAACAATCAAGGTCGTTAAGGCTCGTCAGATCTTTGACAGCCGTGGAAATCCCACTGTAGAAGTTGACGTTACACTCAGCGATGGAACCTTCGCCAGAGCTGCCGTGCCTAGCGGTGCTTCAACAGCGTCATTATCGTACCGACCAGGGATTGTGGTGTTTGTAGTTGTGGTTCGTTTCATATGGTTGCGGCATGGGTTGGTAGTTCTGAAAGTGGTGTGCCTTACTCATTTTGCTTTCTATGAAGGTGTTTATGAGGCTCTGGAATTGAGGGATGGAGGCTCGGACTACCTCGGTAAAGGTGTTAGCAAGGCTGTGGAGAATGTGAATACAATTATAGCACCTGCTCTGCTTGGGAAGGACCCAACCAAGCAGACTGAACTTGACAATTACATGGTACAGCAGCTTGATGGAACTGTTAACGAGTGGGGGTGGTGCAAGCAGAAGCTGGGTGCCAATGCTATTCTGGCAGTGTCACTTGCTGTCTGTAAGGCTGGTGCTGAAGTGAATAAAATTCCTCTGTACAAGCACATTGCCAATCTGGCTGGAAACAAGACTTTGGTGTTGCCTGTTCCTGCATTCAATGTTATCAATGGAGGCTCACATGCAGGAAATAAACTAGCAATGCAGGAATTTATGATTCTCCCAGTTGGGGCATCTTCGTTCAAAGAAGCAATGAAAATGGGCGTAGAAGTATACCATCATCTAAAGGCTGTGATTAAAAAGAAGTACGGACAGGATGCTACTAACGTGGGTGATGAAGGTGGCTTTGCTCCTAACATCCAGGAAAACAAAGAAGGGCTTGAGCTTCTGAAGACTGCCATTTCCCAAGCGGGTTACACTGGAAAGGTTGTAATTGGTATGGATGTTGCTGCTTCAGAATTTTACAATAACAAGGACAAAACATATGACTTGAATTTTAAGGAAGAGAATAATGATGGATCGCAGAAAATCTCAGGAGACAGCTTAAAGAATGTGTACAAATCATTTGTGACAGATTATCCTATTGTGTCTATTGAGGATCCATTTGATCAGGATGACTGGGAGACCTACACAAAATTAACCGGTGAAATTGGTCAGCAAGTGCAGATTGTTGGTGATGATCTCCTCGTCACCAACCCGAAGCGTGTGGAGAAAGCAATTAAGGAGAAGGCTTGCAACGCCCTTCTGTTGAAGGTGAATCAAATTGGTAGCGTAACCGAAAGTATTGAAGCTGTGAGAATGTCTAAGAAAGCTGGCTGGGGTGTCATGACTAGCCACCGGAGTGGTGAAACTGAGGATACCTTCATTGCAGACCTCGCAGTTGGGTTAGCAACTGGTCAGATCAAGACTGGAGCTCCCTGCCGATCTGAAAGGCTTGCCAAGTACAATCAGCTTCTGAGGATTGAGGAGGAGCTTGGTTCAGGTGCTGTTTATGCTGGTTCCAAATTCAGAGCCCCGGTGGAACCCTACTGA 1458 0.4595 MATIKVVKARQIFDSRGNPTVEVDVTLSDGTFARAAVPSGASTASLSYRPGIVVFVVVVRFIWLRHGLVVLKVVCLTHFAFYEGVYEALELRDGGSDYLGKGVSKAVENVNTIIAPALLGKDPTKQTELDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAEVNKIPLYKHIANLAGNKTLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLKTAISQAGYTGKVVIGMDVAASEFYNNKDKTYDLNFKEENNDGSQKISGDSLKNVYKSFVTDYPIVSIEDPFDQDDWETYTKLTGEIGQQVQIVGDDLLVTNPKRVEKAIKEKACNALLLKVNQIGSVTESIEAVRMSKKAGWGVMTSHRSGETEDTFIADLAVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGSGAVYAGSKFRAPVEPY 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01909 485 Gene3D - 173 484 IPR036849 -
Vimu8g01909 485 CDD enolase 7 466 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu8g01909 485 Hamap Enolase [eno]. 2 467 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu8g01909 485 SUPERFAMILY Enolase C-terminal domain-like 187 481 IPR036849 -
Vimu8g01909 485 FunFam Enolase 1 173 483 - -
Vimu8g01909 485 Gene3D - 62 171 IPR029017 -
Vimu8g01909 485 SFLD Enolase 84 467 - -
Vimu8g01909 485 SUPERFAMILY Enolase N-terminal domain-like 4 45 IPR029017 -
Vimu8g01909 485 Pfam Enolase, N-terminal domain 4 45 IPR020811 -
Vimu8g01909 485 Pfam Enolase, N-terminal domain 84 179 IPR020811 -
Vimu8g01909 485 Gene3D - 1 48 IPR029017 -
Vimu8g01909 485 SMART Enolase_C_3 187 481 IPR020810 -
Vimu8g01909 485 NCBIfam phosphopyruvate hydratase 84 478 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu8g01909 485 ProSitePatterns Enolase signature. 390 403 IPR020809 -
Vimu8g01909 485 PANTHER ENOLASE 3 479 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu8g01909 485 Pfam Enolase, C-terminal TIM barrel domain 188 480 IPR020810 -
Vimu8g01909 485 SUPERFAMILY Enolase N-terminal domain-like 55 184 IPR029017 -
Vimu8g01909 485 SFLD enolase 84 467 - -
Vimu8g01909 485 PRINTS Enolase signature 152 168 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu8g01909 485 PRINTS Enolase signature 209 222 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu8g01909 485 PRINTS Enolase signature 77 91 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu8g01909 485 PRINTS Enolase signature 419 436 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu8g01909 485 PRINTS Enolase signature 367 378 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu8g01909 485 PRINTS Enolase signature 390 404 IPR000941 GO:0000015|GO:0000287|GO:0004634|GO:0006096
Vimu8g01909 485 SMART Enolase_N_3 4 179 IPR020811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01909 Vimu-Chr8 24717082 24720796 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01909 K01689 - gmx:100787663 822.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01909 8 24717082 24720796 Vimu8g01909 8 24717082 24720796 ECH