Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01903 ATGGGAAACACGTTCTGTTTCTTCTTTGGATGCGTTGCTCAATCGAGCGTCGGAGTCGTCGAACAGTGGGGTCGCTTCCACCGCCTCGCGCAACCCGGTTGCCACTTTTTCAACCCTCTCGCCGGCGAATGCCTCGCCGGAATCCTCTCCACCAGAATCTCCTCCCTCGACGTCCGTATCGAGACCAAAACCAAGGACAATGTGTTTGTGCAGTTGCTGTGTTCAATTCAGTACCGAGTGATTAAGGAAAACGCGGATGATGCTTTCTATGAATTGCAGAATCCTCAGGAGCAGATCCAGGCTTATGTTTTCGATGTGACACGTGCTATTGTTCCGAGAATGAACTTGGATGAGCTCTTTGAGCAAAAGGGCGAGGTTGCTAGAGCTGTCTTGGAGGAACTTGAAAAGGATGTTGAAATTGAGAACCAAGGCAAAAACATGTCAGAAGACATCTATGAGGCAACCACGATGGCCCACTGTGATTCTGACCATGGGAAGGTGGCACATGAGACACATTCGCTTGGTTTAATGGTGACAGAGGTGATGGGAGAGTATGGGTATAATATAGAGCACATACTCATGGTTGATATTATACCCGATCCTTCTGTGCGTAAGGCAATGAATGAGATCAATGCAGCTCAAAGGATGCAACTTGCAAGTGAGTACAAAGGAGAAGCTGAAAAGATATTGCTAGTTAAAAAGGCAGAAGCTGAAGCTGAGGCCAAGTATTTGGGTGGGGTTGGTGTGGCTAGGCAACGGCAAGCTATTACAGATGGCTTGAGAGAGAACATCCTGAATTTCTCTCACAAAGTAGAAGGCACTAATGCTAAGGAGGTGATGGATCTTATCATGATAACTCAGTACTTTGACACAATCAAAGACCTTGGGAACTCATCAAAGAATACCACTGTTTTTATACCCCACGGACCTGGCCATGTTAGGGATGTTGGAGAGCAGATACGCAACGGACTGATGGAAGCAGCCAGTGCTCAAGTAAATGTGGAGGAGTGA 1011 0.4708 MGNTFCFFFGCVAQSSVGVVEQWGRFHRLAQPGCHFFNPLAGECLAGILSTRISSLDVRIETKTKDNVFVQLLCSIQYRVIKENADDAFYELQNPQEQIQAYVFDVTRAIVPRMNLDELFEQKGEVARAVLEELEKDVEIENQGKNMSEDIYEATTMAHCDSDHGKVAHETHSLGLMVTEVMGEYGYNIEHILMVDIIPDPSVRKAMNEINAAQRMQLASEYKGEAEKILLVKKAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEGTNAKEVMDLIMITQYFDTIKDLGNSSKNTTVFIPHGPGHVRDVGEQIRNGLMEAASAQVNVEE 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01903 336 SMART PHB_4 7 159 IPR001107 -
Vimu8g01903 336 Pfam SPFH domain / Band 7 family 14 227 IPR001107 -
Vimu8g01903 336 SUPERFAMILY Band 7/SPFH domain 48 139 IPR036013 -
Vimu8g01903 336 CDD SPFH_like_u4 11 324 - -
Vimu8g01903 336 Gene3D Band 7 domain 46 213 IPR036013 -
Vimu8g01903 336 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 180 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01903 Vimu-Chr8 24669182 24672164 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01903 - - gmx:100804986 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01903 8 24669182 24672164 Vimu8g01903 8 24669182 24672164 ECH