Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01893 ATGAAGCCTTCTGTGCGGGGTTTGTCACTTGTTCTTGTTCCTCTGCTTCTCTCCCTCTTCTTTGTTGCACTCATGCCTAAGGAATCCGCCATGAAAACCTATGAGGTGTTTGGAGTGAAGATAGAGAAGAACCCACCTCAGTCCAAACTCACTGAACTTGGAGTCTCAACTTGGAACAAGTGGGAAGGTGGTCCAACCAAAATTCCATGGTCCTTTAAAGAAGAAGAGACTATGTATCTTCTGGAGGGAAAAGTGAGAGTTACTGTTGAAGGATCTGTTGGGTCTTTTGAAATTGGGCGTGGTGATTTAGTTGTCTTCCCAAAAGGAATGAACATTACTTGGGAAGTGATTGAAGCTGTGAAGAAGCACTACAGCTTGAAAAAATAA 387 0.4315 MKPSVRGLSLVLVPLLLSLFFVALMPKESAMKTYEVFGVKIEKNPPQSKLTELGVSTWNKWEGGPTKIPWSFKEEETMYLLEGKVRVTVEGSVGSFEIGRGDLVVFPKGMNITWEVIEAVKKHYSLKK 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01893 128 PANTHER OS04G0445200 PROTEIN 29 127 - -
Vimu8g01893 128 CDD cupin_TM1112-like 57 126 - -
Vimu8g01893 128 Gene3D Jelly Rolls 27 126 IPR014710 -
Vimu8g01893 128 Pfam EutQ-like cupin domain 51 124 IPR008579 -
Vimu8g01893 128 SUPERFAMILY RmlC-like cupins 46 124 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01893 Vimu-Chr8 24570193 24572054 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01893 K06995 - gmx:100807654 214.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01893 8 24570193 24572054 Vimu8g01893 8 24570193 24572054 ECH