Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01857 ATGGGGTTGAGATTGAACGAAACATTCTACCTTTCGCATGGATCACCAGCTCTGGCCGTAGATGATTCGATTCCGGCGAGGAAGTTCTTCACTTCCTGGAAAGAGCGGTTTCCGACGCCACCCTCCGCCATTCTCGTCGTCTCCGCCCACTGGGACACCCATGTTCCTACCGTCAACGTCGTTGACCGAAACGACACCATCTACGACTTCTATGGCTTCCCCGAATCCATGTACAAGGAGCTTCTGATAGGATCAGGGTTTGAGCATGTGAAAGAAGACATGAACCGTGGGCTTGACCATGGTGCATGGGTGCCACTGCTGTTGATGTACCCTGAAGCAGACATACCAGTGTGTCAACTTTCACTTTCATCTAACAAAGGGCCCACTTACCACTATAACATGGGAAAGGCTTTGGCTCCTCTCAAAGATCAAGGTGTTCTTATCATTGGGTCTGGGAGTGCCACCCATAACCTCAAAGCAATGGGCCCTCGTAATAGCCCACCTTCTCCATGGGCTCAGGCTTTTATGACTTGGCTCAAAACCTCTCTTCTTGAGGGAAGGTACGAGGAAGTGAATGAATACGAAGAGAAAGCCCCATATGCAAAAATGGTTCATCCCAGGTCAGATCACTTCTTGCCACTGCATGTAGCCATGGGAGCTGCTGGTGAAAATGCAAAGGCCAAAGTTATTCATGATAGTTGGGATGCTGGTTCTATCTCTTGTGCTTCTTTCAGTTTTACAGCTGCTAACGCTTAA 756 0.4894 MGLRLNETFYLSHGSPALAVDDSIPARKFFTSWKERFPTPPSAILVVSAHWDTHVPTVNVVDRNDTIYDFYGFPESMYKELLIGSGFEHVKEDMNRGLDHGAWVPLLLMYPEADIPVCQLSLSSNKGPTYHYNMGKALAPLKDQGVLIIGSGSATHNLKAMGPRNSPPSPWAQAFMTWLKTSLLEGRYEEVNEYEEKAPYAKMVHPRSDHFLPLHVAMGAAGENAKAKVIHDSWDAGSISCASFSFTAANA 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01857 251 CDD 45_DOPA_Dioxygenase 8 246 IPR014436 GO:0008270|GO:0016701
Vimu8g01857 251 PIRSF Doxgns_DODA 2 248 IPR014436 GO:0008270|GO:0016701
Vimu8g01857 251 Pfam Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 246 IPR004183 GO:0006725|GO:0008198|GO:0016491
Vimu8g01857 251 Gene3D - 4 247 - -
Vimu8g01857 251 SUPERFAMILY LigB-like 8 246 - -
Vimu8g01857 251 PANTHER UNCHARACTERIZED 4 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01857 Vimu-Chr8 24339007 24340607 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01857 K15777 - gmx:100797161 424.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01857 8 24339007 24340607 Vimu8g01857 8 24339007 24340607 ECH