Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01787 ATGAAGATGACATTGGTAGCATTGGTCCTAGTGGTTGCCTTGAGCACAAAGGCACTAGTTGGGGAAGCAGTTGCTGCACCAGAGCAAATTGTGGACACATCAGGAAAGAAGGTGAGAGCTGGTGGCCTTGCTCTATCAACCACAGGTCAAGATTGCCCTCTTGATGTTGTAGCTGTTGATGGTTACCAAGGCCTCCAATTGAGCTTTCTTCCTGTTAATGATAAGAAAGGTGTCATTCGCGTTTCCACTGATCTCAACATCTTTTTCTCCACCTACACAACTTGTCCACAGTCCACAGTCTGGAAGCTTAAGGACTATGATTATTCAACATCACAGTGGTTTCTCACAACTGGTGGTTCTTTGGGTAACCCTGGCTCTCAAACCATCAGCAATTGGTTCAAGATTGAGAAGTACGAGGATGCTTACAAGATGGTTTATTGTCCAAGTGTGTGCAATTATTGCAATTATCCATGCAGTGATATTGGAATATATCAGGACCAATATGGCAAGCGTTTGGCTCTAACTTCTGAGCCATACAAAGTGCAGTTCCAGAAGGTTCAATACTAA 567 0.4374 MKMTLVALVLVVALSTKALVGEAVAAPEQIVDTSGKKVRAGGLALSTTGQDCPLDVVAVDGYQGLQLSFLPVNDKKGVIRVSTDLNIFFSTYTTCPQSTVWKLKDYDYSTSQWFLTTGGSLGNPGSQTISNWFKIEKYEDAYKMVYCPSVCNYCNYPCSDIGIYQDQYGKRLALTSEPYKVQFQKVQY 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01787 188 CDD STI 29 185 IPR002160 GO:0004866
Vimu8g01787 188 PANTHER KUNITZ TRYPSIN INHIBITOR 2 5 186 IPR002160 GO:0004866
Vimu8g01787 188 Gene3D - 28 188 - -
Vimu8g01787 188 SMART kul_2 29 187 IPR002160 GO:0004866
Vimu8g01787 188 Pfam Trypsin and protease inhibitor 38 185 IPR002160 GO:0004866
Vimu8g01787 188 SUPERFAMILY STI-like 26 186 IPR011065 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01787 Vimu-Chr8 23692378 23692983 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01787 - - vra:106757068 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01787 8 23692378 23692983 Vimu8g01787 8 23692378 23692983 ECH