Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01771 ATGCCTAGTGCCCCTCAAGAGATAGGTAATGATAGTCCAAAAGTTTCAGAAGCAAGAAAGGATTCCGTATCAACAATATATCAACAACAACATAAATTCACATCTTTAGAGGGTTGTCAAGAATCATCTCTTTCAAGGATTAACTCGGATAGTAGGTGTGCCATCATTTCGTTCAACTTTGAGCCTGATGGAACCTGGAGAATTGTTGCCCTACCAGGGCAGTGTCTCAATTACATTAACTTAGCTGCTGGTGTAAATATGGATGGTGTGCAACTGCTTGTCTCTCCGCTTAATAGGTTGAAGATTGATCAATGTAAGGGCCCTAGAGTGCCTCTTCCTTCCTATGCTTATTCAGCTAAATCATTTACAAAAAGAGGCTTTACTAGTTCAAATGTACATCGTCGATGTCAAAACAAGATTGCTAGCAGAGCTTCTAAACTCAACGAACTCTCTAACAAGTCCAGTTCTCAAAGCACATTAGTATGCAGCCCTGGTTTGTTCCCCGATAGTTCGGCAGAAGTTAATTCATCTGATAAGTATGCAAGTAATTCCAAGGACGATGACAAGTCTTCGAAGAAAAACTCAAGAAAACAAGGAAGAAAGAAATTTAGACGGAGTAAGAAGAAGTCAAGTCACAGGTCTACCGAACGTGAAGTTCCTACTGAGGAAGTTGTCTGTCCAAGTTTGACCTCTGAAACCTGCAGCAGCAATGTTGGGGATAAGGACGGCGTGACAGAATTTTTAACTTCTGATGATAGATTAATAAAATCTGATTGTGACAGAAATGGGATGAATGACATCAAAGTTATGGAAGCACCTAACGTTAGTAACTCTTATCTTGATCAGGAAGCGATGTTAAAGGATTCTGCACCTATTATTCCAAGTTCTGCAGGAGAATGTGCCACATTTGAATCCAAGAATCAGCTCAAAGGTAGGGGCCCTGAGGCAGTCATTGATAGAGAAATAAAGAACATCCAGCATACTCAGCCATGCAGTTTTAATGATATACAAGACTCTTTAGTGCTAGATTCAGTTTCAGTTTGTTCCAGAAGTGATGGAAGTATAAATACAGATGATATAGGAAAACAGTCCAACAAGTCAAATTGCACAACCACTTCAGATTCTGGAGATGGATATGTTTTTTGTCAAAACTTGACGAATGGCATTCCCAATAACAATGAAGATATTGAGGGGATTATGCACAGTGGTCAAAATTGCATCGGTAATGATAAGAGAGTTAAGCAAAAGAGAACTATGTCGCACAGTTCAGGTTTAAACAAATTTGGGGGTGTTGGAATTTTGCAAGGTCGAAAAGGGAAGGAAAACAGTCATTCTGTATGGCAAAAGGTTCAGAAGAATAGTTCTGATGAATGTGGCGGTGATTTGAAGAAAGTAAACACTACTTTGTCCCAACTTGCTTCTATTGGGGAAAAGGATCCCTCAGTTATCAAAGAATGTAAATCTGTTGGTGTGAACTGTGTATCAAAAACTGAGGATAAGAAACAAATGAAAAATAAAATTGGTAAGAAATCTAAAGTTAAAATGGACTCAGTATCAAAAAAGGGACAGAGCAATTATTCTAGGAAGAGTTTGCATCTTAACAGGTCTTTGTCAAATGATCACGGGAAGGTTGGTGCCGAACAGAATGATATGCTTCTTGTCTCAACTCAGGAAATTGATCAGCATGGACTGAATAATGACTCTGGATTTAATTCTGATGTTCACTGCTTGTTGGATGGGGTCCAGACCAATGGGGTTGAACAAGTAACATCTGAAAAAATTCACAGTGCAGAATTTCATCTGGAGGAGTCAGATCCAAAAAGTAGTGCCTGCCATACTGTTGCAGACACAAACAATGAAAGTATAGATAGTGAGGATAGGTCGTTAGTAAGGCCAAGTGAGAATGTCAATCAATCAAATATGTCTGTAGAGATGTCTCCAGCATCATGCAATCTTGAAGGTGACGAGGTTGGTCAAACAGAGAAAGAAGTTTCTTCTGCAGACTACAATGCACAAAACCAGTGCTCTGGAACTTCCCTCTGGAAATGGATACCAATTGGGAAAAAGGATACTGGGTTGGAAAAATATGAATCTAGTATTTTACCACCAGACTATTCTGATGCATCCTCTAGGAACAATATTAACCATGAAAGCAGTGTTGAACCAGAACTGGCCTCTTCTGAAAGTAAGGATTCTTCAATAAATGCAAGCAGAACATCAAATGGAGAGATTTACCACAATGTGTCCTGTCTAGGTGAGGGTGAGAACAAGAAATTGGGTGGGCAGGTTCCATTTACATTCACACAGCATAGGGACAAGAAAGAAGTTTCTAGTCACATGTTTAATGAAAGCAAAAAACAAGAAATGTTAGAAAGGGATTCTTACAGAATATCCCAAGCTGTGAATGATGCATGTAGGGCACAACTAGCTTGTGAAGCGGTGCACGTGGCTACAGGTGGTCCAGTTGCAGAGTTTGAAAGGCTACTTCATTTTGGCAGTCCTGTGATTTGTAAATCAGTTGATTCTGTCAGTTGTTCAACCTGCTCACGCAACCATGCTGGTGGTGTCTCACTGTGCAGACACGAGATCCCTAACCTTTCTTTGGGATGTCTGTGGCAGTGGTATGAGAAACATGGGAGCTATGGATTAGAGATAAGTGCTCAGGATCATGAGAATCCAAAGACACAAGGTGTTGGTGATTTTCCATTCCGCGCGTATTTTGTCCCTTCTTTATCAGCAGTTCAGCTGTTTAAGAACCATGAAGATCAATGTGTAAATAGCAGTGACAAGCTTTCAAATTGTGAGGTTTCAGAGGCATGTCAAATGATTAATTTTTCAGAAAACTCATCTACTGCCACTGAACATTCAATATTTTCTGTTCTCTTTCCTCAGCCTCGAAATCAGGATGCAAGCATTGAAACTCCGAAGGAGACGGATTCTATCAGTAATAGATCTGGTGATTTAGAACTTCTTTTTGAATATTTTGAATTTGAGCAACCTCAACAAAGACAGCCACTTCATGAGAAGATACAAGAACTGGTCAGAGGAAATATGCCAATCCAATCTTCAACATATGGGGACCCAACAAAACTGGATTCAATAAAGCTGCGAGATCTTCACCCTAACTCTTGGTTCTCAGTTGCATGGTATCCTATTTACCGCATACCAGATGGCAACTTTCGTGCATCTTTTCTGACTTATCATTCACTTGGACATTTGGTCCGTAGAAGAACAGGTTCAGATTTGTCAACATCAGGTTCTTGCATAGTATCTCCAGCTGTGGGTCTCCAAAGCTACAATGACCAGGGAGAATGCTGGTTGAAGCTGAAGCACTCAGCAGAGGCAGCAGAAATGGTGGGCTTAGACCCTTCTTTAGCCCTGAGAGAACGTTTGAAGACACTTGAGGAAACAGCATGTGTAATGGCAAGAGCTGTAGTGACGAAGGGGAACCAAAGATGTACTAACAGACATCCTGATTATGAGTTTTTCTTGTCTAGGCGACGGTATTGA 3510 0.4043 MPSAPQEIGNDSPKVSEARKDSVSTIYQQQHKFTSLEGCQESSLSRINSDSRCAIISFNFEPDGTWRIVALPGQCLNYINLAAGVNMDGVQLLVSPLNRLKIDQCKGPRVPLPSYAYSAKSFTKRGFTSSNVHRRCQNKIASRASKLNELSNKSSSQSTLVCSPGLFPDSSAEVNSSDKYASNSKDDDKSSKKNSRKQGRKKFRRSKKKSSHRSTEREVPTEEVVCPSLTSETCSSNVGDKDGVTEFLTSDDRLIKSDCDRNGMNDIKVMEAPNVSNSYLDQEAMLKDSAPIIPSSAGECATFESKNQLKGRGPEAVIDREIKNIQHTQPCSFNDIQDSLVLDSVSVCSRSDGSINTDDIGKQSNKSNCTTTSDSGDGYVFCQNLTNGIPNNNEDIEGIMHSGQNCIGNDKRVKQKRTMSHSSGLNKFGGVGILQGRKGKENSHSVWQKVQKNSSDECGGDLKKVNTTLSQLASIGEKDPSVIKECKSVGVNCVSKTEDKKQMKNKIGKKSKVKMDSVSKKGQSNYSRKSLHLNRSLSNDHGKVGAEQNDMLLVSTQEIDQHGLNNDSGFNSDVHCLLDGVQTNGVEQVTSEKIHSAEFHLEESDPKSSACHTVADTNNESIDSEDRSLVRPSENVNQSNMSVEMSPASCNLEGDEVGQTEKEVSSADYNAQNQCSGTSLWKWIPIGKKDTGLEKYESSILPPDYSDASSRNNINHESSVEPELASSESKDSSINASRTSNGEIYHNVSCLGEGENKKLGGQVPFTFTQHRDKKEVSSHMFNESKKQEMLERDSYRISQAVNDACRAQLACEAVHVATGGPVAEFERLLHFGSPVICKSVDSVSCSTCSRNHAGGVSLCRHEIPNLSLGCLWQWYEKHGSYGLEISAQDHENPKTQGVGDFPFRAYFVPSLSAVQLFKNHEDQCVNSSDKLSNCEVSEACQMINFSENSSTATEHSIFSVLFPQPRNQDASIETPKETDSISNRSGDLELLFEYFEFEQPQQRQPLHEKIQELVRGNMPIQSSTYGDPTKLDSIKLRDLHPNSWFSVAWYPIYRIPDGNFRASFLTYHSLGHLVRRRTGSDLSTSGSCIVSPAVGLQSYNDQGECWLKLKHSAEAAEMVGLDPSLALRERLKTLEETACVMARAVVTKGNQRCTNRHPDYEFFLSRRRY 1169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01771 1169 MobiDBLite consensus disorder prediction 1 21 - -
Vimu8g01771 1169 MobiDBLite consensus disorder prediction 619 648 - -
Vimu8g01771 1169 MobiDBLite consensus disorder prediction 703 738 - -
Vimu8g01771 1169 MobiDBLite consensus disorder prediction 502 543 - -
Vimu8g01771 1169 MobiDBLite consensus disorder prediction 180 194 - -
Vimu8g01771 1169 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 9 1168 - -
Vimu8g01771 1169 MobiDBLite consensus disorder prediction 502 517 - -
Vimu8g01771 1169 MobiDBLite consensus disorder prediction 518 533 - -
Vimu8g01771 1169 MobiDBLite consensus disorder prediction 631 647 - -
Vimu8g01771 1169 Pfam Protein of unknown function (DUF789) 823 1163 IPR008507 -
Vimu8g01771 1169 MobiDBLite consensus disorder prediction 172 226 - -
Vimu8g01771 1169 MobiDBLite consensus disorder prediction 195 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01771 Vimu-Chr8 23587845 23596127 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01771 - - gmx:100798960 1571.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01771 8 23587845 23596127 Vimu8g01771 8 23587845 23596127 ECH