Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01743 GGGCTTGAAGCAAGGATACTGATGGTGAGGGACCCCAACATGGGCAAGGAAAAGGTGATTTCAAATTTCACATTGCTTCACTCATCATCCACTAAAGGGTCCAAGGACAAGAGCATCCCCAGCAATAACATGCCCTCCTGGCTTCTCACCAACATTTCTGGTAATGTTGAAACGGTGGAAACCTTTTTCTGGCATTCATCAATGAATGGAAGGAAGAAGGGAGAAATGAAAGAGAAGAATCCCCCATACAGGACATTGTTCCCTTTTATGGTGTCATGGTTTGGTAACATGTCCCTTTCTCAGTGCTCGATTACTCATCAACCAAGTTTGGATAGGGTCTATTTAACCTCCTTAGTAGTACATCCCATTTGTCAATCTTTTTACAAGTTCAAACTTAATGGTTCTGAAGCTATGGACTTGTGTAAACCCGAATTGGAGGAGAGGATGAAAGTGTTGACAATGAGTACAACCGAAGAAGAAGAAATTGGTGATACTTTTGCTGAAAGAGCAGAATCCTACTACCAAAAGAGACCCCAGCTACTGTCCCTTCTGCAGGATTTGTACAATGGCTACATAACCTTATCTGATCGTTACATCCAAACACTGGCCAAACACAAGCATCATAGTAGACACTCTTCCCAAGTCTCAGCTGTTGATGAAGGCTTCTCTGACCAGGAAGAAACAAGTGGCGTGAGCCACTTTGATTCAGATATAGAGAGCTCAATCTCCTACCAACACCCTCCACAACTAGTGATGCCTGTTCTTCTCGCTAAGAGCTCCATGCTTGATGTTGATGCCGTTGTTGCCGAGCTTGTGGTCAGGAATGTTGAGTATGATTTGTTGATGCACGAGGTTGGTGTCATGGAGAGGAGGTATTGTGAGTCCTCGAGAAAAAGTGAGCTACAGAAGAGTCTTCTTGAGGTGTTGGAATCTGAGAGGATCGTTCTGTTGAATGAAAATGCTAGTTTGAGTTACAGAATCAACACTTTGGTGGAAGAGAACAAAGAGCTGGCATCTGAATCAGTTTTCATCAAGAGAAAGGCTGGTGAACTGGCAAAGTGTGTGCTGAAGATGAGGGAGGATCATAGGGTGTACATGCTACACAGGAAAATTGAAGATCTTCAAGCACAGATACATGGCTTGGAGAAGAGGAACAAGGAGTACTATGAGAAACTTCTGAGAAGAGATGGTCAAGATGGTAACAAAGGGAAGAGTGGGGAGGGGATAGCTTTGGAGGTTTGTGTTCAGATGGATAAGTTTAGGAGGTTCAAGTGGAAAGATGGTAATTCTTCTAGGAAGAGATTTGATGGGAAGAAATCCCCTAGTTTGTGGAAAAAACTGAAGAACATGGATTTGTTATTGTGTGGCACTAATCCAACTTGTGCTTGA 1389 0.432 GLEARILMVRDPNMGKEKVISNFTLLHSSSTKGSKDKSIPSNNMPSWLLTNISGNVETVETFFWHSSMNGRKKGEMKEKNPPYRTLFPFMVSWFGNMSLSQCSITHQPSLDRVYLTSLVVHPICQSFYKFKLNGSEAMDLCKPELEERMKVLTMSTTEEEEIGDTFAERAESYYQKRPQLLSLLQDLYNGYITLSDRYIQTLAKHKHHSRHSSQVSAVDEGFSDQEETSGVSHFDSDIESSISYQHPPQLVMPVLLAKSSMLDVDAVVAELVVRNVEYDLLMHEVGVMERRYCESSRKSELQKSLLEVLESERIVLLNENASLSYRINTLVEENKELASESVFIKRKAGELAKCVLKMREDHRVYMLHRKIEDLQAQIHGLEKRNKEYYEKLLRRDGQDGNKGKSGEGIALEVCVQMDKFRRFKWKDGNSSRKRFDGKKSPSLWKKLKNMDLLLCGTNPTCA 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01743 462 Coils Coil 364 391 - -
Vimu8g01743 462 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 115 205 IPR011684 GO:0003779
Vimu8g01743 462 Pfam KIP1-like protein 139 198 IPR011684 GO:0003779
Vimu8g01743 462 PANTHER PROTEIN NETWORKED 4A 45 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01743 Vimu-Chr8 23306413 23309372 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01743 - - gmx:100776808 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01743 8 23306413 23309372 Vimu8g01743 8 23306413 23309372 ECH