Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01646 ATGGCGTCTCAGAAGGCGATCGGTTTTGTCGGCGTTGATGAGTTCAGCTTGGAGATGGCGCATTCTGCGATTCGCCGTGGATACGGTGTGCGAGCTTTTGAGATAAATAATCCTGTCATTGAAGAAATCGTGAAGCTTGGAGGAGTGAGATGTTCAAGCCCATCGGAAGCTGGGAGAGATGTAACAGCTCTAGTTATCCTAATATCTCACATAGATCAAACTAATGATCTCATTTTTGGAGATGAGGGTGCTTTGAAAGGTCTAAAACCAGATACTGTTCTTATTCTCCGTTCCACCTTTTTACCATCATTTCTCCATAAACTGGAGAAGGATCTAGAAATCCATGAGATTGCTTATGTTGTTGATGCATATGTCTCTTATGGGAGATCCGATGCTTTGAATGGAAAAGTCATCATTGTATCATCTGGAAGACTAGATGCAATTGCACGTGCACATCATATTCTTACTGCAATGTGTGAAAAGCTCTTCACTTTTGAGGGTGAAATTGGTGGTGGCAGCAAGGTTAAAATGGTTAATGTGATGCTGGAAGGCATTCATTTCATTAATGCAGTGGAGGCTCTCTCTCTTGGTGCCAAAATTGGAATTCATCCTTGGATAATCTATGATATAATTTCCAATGCTGCAGGAAATTCATGGGCGTTCAAGAATTATTTACCCCTTTTGTTGAAGGGAGAGGTTAATCATCAAATTCTGAACACTTTTATTAAGGAGCTGGAAACCATTTTGAATATGTCCAAGTCACTTACTTTTCCGCTTCCAATTTTGGCTGCTACTCATCTACAACTTATTCACGGGGCTTCAATTGTTGATAGTGGAGAAGATGTTACAGTATTGACCAAGGTTTGGGAAAAGGTTTACGGGGTTAAAATTTTAGATGCTGCAAATACTGATGCGTATAACCCAGAGCAACTGGCATCTAAATTTACTACTGATTCTAAGAGTGTGAGAAAGATTGGTTTTATCGGCCTTGGAGCTATGGGATTTGGCATGGCAACTCATTTACTGAGATCAGAATTCTGCGTTGTTGGTTATGACGTGTATAAACCAACCCTAACACGATTCACAAATGCTGGTGGCCTCATTGGAAATTCTCCAGCTGAAGTGAGCAAAGATGTTGAAGTTCTCATAATTATGGTCACAAATGAATCGCAAGCAGAAAATGTTTTATATGGAGAAAATGGTGCAGTTTCAGCTCTTACACCTGGAGCATCTATCATTCTTTCTTCCACGGTTTCCCCTGCATACGTGAGTCAGTTGGAGCATAGATTGCAAATGGAAAGTAAGGTTGATAAAATGAAAATGAAGGATAGTTGTTCTGTGGAAAAGAATACTGCTGTTGAGAAGGAGAATTCTGCTGCAGAGGTTTTGTTCAATTATTCTATTAGTAACCATCGACATGATAATAATGCAGATGAAGGTAAGAATTTGAAGTTGGTGGATGCCCCAGTGTCTGGAGGTGTTCAGAGGGCCTCATTGGGAACACTTACGATAATGGCTTCAGGAACTGATGATGCCCTTAAGAGTGCTGGTCAGGTCTTAGCAGCCTTGAGTGAGAAGCTTTATATCATCAAAGGTCGTTGTGGTTCTGGAAGTGGTATAAAGATGATTAACCAATTGCTTGCTGGAGTTCACATTGCCGCAGCTGCTGAGGCAATAGCATTTGCAGCTCGGTTGGGTTTGAATACAAGACCGTTGTTCAATTTCATTACGATTAGTGGGGGAACTTCCTGGATGTTTGAAAATCGTGGCCAACACATGATAGACAATGATTACACACCATGTTCAGCACTTGATATCTTTGTGAAGGACATGGGAATTGTTACTCGTGAATCATCTACGTGGAAAGTTCCACTTCAGCTATCAACTATTGCTCACCAACTATATCTGGCAGGCTTACCAACTTTTGCACAGGTTTACGAGATGCTAACTGGTGTAAGAGTTGAAGGAAAACTTCAGGCACAAAGGAAAGACACTATGTTACGTTCTCTTCCACCGGAGTGGCCCCAAGATCATGTTCTTGATGTACAAACACTAAAAGAAAGTAATTCAAAGATTTTAGTTGTATTAGATGATGATCCGACAGGAACACAAACTGTTCATGATATTGAGGTATTAACAGAATGGACTACTGAGTCACTGATTGAGCAGTTTAGGAAAAGTCCAAAATGCTTTTTCATTTTGACAAACTCCAGGTCACTTAGTTCTGACAAGGCCAGTGCACTGATAAAAGAGATTTGCAGAAATCTGGACACTGCAGCAAAATCATTTGACAGCATTGACTATTCGGAAGCAGATGCGGTTGTTTCAGTATTGGGTGAAATGGATGCGTGGATAATTTGTCCCTTTTTCCTTCAAGGGGGTCGTTATACTATTGCAGACACACACTATGTTGATGATTCTGATATGCTTGTTCCAGCCGGGGACACAGAGTTTGCCAAAGATGCTTCCTTTGGCTACAAATCTTCAAACCTGCGTGATTGGGTAGAGGAGAAGACAAATGGCCGAATACTTGCAAGTAGTGTTGCTTCTGTTTCTATCCAACTTTTGAGGAAAGGAGGTCCAAATGCAGTTTGTCAGCATCTGTGCAGTTTGCAGAAGGCAGAATTGACAGGAAAACGTTTCTTGTGTCGCACTGCTGCTAGTTTTGTCTCTGCCCTTATGGGAATCATCTCTAAGCCTCCAATATTGCCAAGTGATCTAGGAATAGCTAGTGAAAAGAATGGTGGTCTGATAGTTGTGGGGTCCTATGTTCCAAAAACAACAAAGCAGGTTGAAGAACTCAAACTACAGTGTGGTCAGTTCTTAAAAAGCATTGAGGTATCAGTTGAAAAACTTGCAATGAGCCCTATTGAGGTGAGGGAGGAGGAAATCAGTAGAACAGCTGAATTAGCAGACGTATATCTTAAAGCTCATAAAGACACTTTAATAATGACCAGCCGAAATCTCATAACTGGAAGAACTGCAGCTGAGAGTTTGGACATTAACTATAAAGTGAGTTCTGCTTTGGTGGAAATAGTGAAAAGAGTAACTACAAAACCTCGCTACATAATTGCAAAGGGTGGTATTACGTCTTCAGACCTCGCTACAAAAGCCCTTGGTGCAAGATGTGCGAAGATAGTTGGACAAGCACTTGCTGGTATTCCCTTGTGGCAATTAGGCCCTGAAAGTAGACATCCTGGAATTCCTTACATTGTCTTCCCTGGTAATGTTGGTAACAGCACAGCATTGGCAGAAGTTGTGAAGTCATGGACTTACCCAATCATTTTTACATCAACGAAAGAAATTCTTAATAATGCAGAAAAGGGTGGTTATGCTGTTGGAGCATTTAATGTCTACAATTTGGAAGGAGTTGAAGCTGTTGTTTCTGCTGCAGAGGAAGAACAGAGTCCTGCTATATTACAGATCCATCCAGGGGCCTTGAAGCAAGGAGGAATTCCCTTGGTTGCTTGTTGCATTTCTGCTGCAAAGCAAGCCAGTGTTCCAATTACTGTTCACTTTGATCATGGAACTTCAAAGCAGGATCTTGTGGAAGCTCTTGATCTGGGATTCAGTTCCATTATGGTTGATGGTTCACATCTTTCTTTCAACGAAAATGCTGCATTCACAAAATTTATAACATTACTGGCGCACTCAAAAAATATGCTGGTGGAAGCTGAGTTAGGAAGATTGTCAGGGACAGAAGATGATTTGACTGTAGAAGAGTTTGAAGCCAGACTAACCGATGCATCAAAATTCATAGATGAGACCGGAATAGATGCTTTGGCAGTGTGTATTGGTAATGTGCATGGGAAGTACCCTGCAAGTGGTCCAAATCTCAGACTTGATCTGCTGAAGGAGCTGCATGCTTTGAGCCTGAAGAAAGGAGTTTATCTGGTGCTTCATGGTGCGTCTGGTTTGAGCAAAGAACTTGTTAAGGAGTGCATAAATCTTGGTGTTAGAAAGTTCAATGTGAACACCGAAGTAAGGAAAGCATACATGGACTCCCTGATTACCCCCAAGAACGATCTAGTTCATGTCATGGCTTCTGCTAAGGAAGCCATGAAAGCTGTGGTTGCAGAAAAGATGCATCTCTTTGGTTCAGCAGGAAAGGCGTAA 4116 0.4147 MASQKAIGFVGVDEFSLEMAHSAIRRGYGVRAFEINNPVIEEIVKLGGVRCSSPSEAGRDVTALVILISHIDQTNDLIFGDEGALKGLKPDTVLILRSTFLPSFLHKLEKDLEIHEIAYVVDAYVSYGRSDALNGKVIIVSSGRLDAIARAHHILTAMCEKLFTFEGEIGGGSKVKMVNVMLEGIHFINAVEALSLGAKIGIHPWIIYDIISNAAGNSWAFKNYLPLLLKGEVNHQILNTFIKELETILNMSKSLTFPLPILAATHLQLIHGASIVDSGEDVTVLTKVWEKVYGVKILDAANTDAYNPEQLASKFTTDSKSVRKIGFIGLGAMGFGMATHLLRSEFCVVGYDVYKPTLTRFTNAGGLIGNSPAEVSKDVEVLIIMVTNESQAENVLYGENGAVSALTPGASIILSSTVSPAYVSQLEHRLQMESKVDKMKMKDSCSVEKNTAVEKENSAAEVLFNYSISNHRHDNNADEGKNLKLVDAPVSGGVQRASLGTLTIMASGTDDALKSAGQVLAALSEKLYIIKGRCGSGSGIKMINQLLAGVHIAAAAEAIAFAARLGLNTRPLFNFITISGGTSWMFENRGQHMIDNDYTPCSALDIFVKDMGIVTRESSTWKVPLQLSTIAHQLYLAGLPTFAQVYEMLTGVRVEGKLQAQRKDTMLRSLPPEWPQDHVLDVQTLKESNSKILVVLDDDPTGTQTVHDIEVLTEWTTESLIEQFRKSPKCFFILTNSRSLSSDKASALIKEICRNLDTAAKSFDSIDYSEADAVVSVLGEMDAWIICPFFLQGGRYTIADTHYVDDSDMLVPAGDTEFAKDASFGYKSSNLRDWVEEKTNGRILASSVASVSIQLLRKGGPNAVCQHLCSLQKAELTGKRFLCRTAASFVSALMGIISKPPILPSDLGIASEKNGGLIVVGSYVPKTTKQVEELKLQCGQFLKSIEVSVEKLAMSPIEVREEEISRTAELADVYLKAHKDTLIMTSRNLITGRTAAESLDINYKVSSALVEIVKRVTTKPRYIIAKGGITSSDLATKALGARCAKIVGQALAGIPLWQLGPESRHPGIPYIVFPGNVGNSTALAEVVKSWTYPIIFTSTKEILNNAEKGGYAVGAFNVYNLEGVEAVVSAAEEEQSPAILQIHPGALKQGGIPLVACCISAAKQASVPITVHFDHGTSKQDLVEALDLGFSSIMVDGSHLSFNENAAFTKFITLLAHSKNMLVEAELGRLSGTEDDLTVEEFEARLTDASKFIDETGIDALAVCIGNVHGKYPASGPNLRLDLLKELHALSLKKGVYLVLHGASGLSKELVKECINLGVRKFNVNTEVRKAYMDSLITPKNDLVHVMASAKEAMKAVVAEKMHLFGSAGKA 1371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01646 1371 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 162 IPR036291 -
Vimu8g01646 1371 Gene3D Aldolase class I 1092 1371 IPR013785 -
Vimu8g01646 1371 Pfam Nucleotide-binding C-terminal domain 917 1083 IPR031475 -
Vimu8g01646 1371 CDD TBP_aldolase_IIB 1099 1369 IPR000771 GO:0005975|GO:0008270|GO:0016832
Vimu8g01646 1371 Gene3D - 692 883 IPR037051 -
Vimu8g01646 1371 Gene3D - 908 1090 IPR042213 -
Vimu8g01646 1371 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 170 285 IPR029154 GO:0051287
Vimu8g01646 1371 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 535 637 IPR029154 GO:0051287
Vimu8g01646 1371 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 324 431 IPR006115 GO:0050661
Vimu8g01646 1371 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 473 528 IPR006115 GO:0050661
Vimu8g01646 1371 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 7 163 IPR006115 GO:0050661
Vimu8g01646 1371 SUPERFAMILY Aldolase 1097 1371 - -
Vimu8g01646 1371 Pfam Fructose-bisphosphate aldolase class-II 1098 1370 IPR000771 GO:0005975|GO:0008270|GO:0016832
Vimu8g01646 1371 Gene3D - 532 652 IPR013328 GO:0016491
Vimu8g01646 1371 Gene3D - 167 297 IPR013328 GO:0016491
Vimu8g01646 1371 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 323 532 IPR036291 -
Vimu8g01646 1371 PANTHER 3-HYDROXYISOBUTYRATE DEHYDROGENASE-LIKE 1, MITOCHONDRIAL-RELATED 3 296 - -
Vimu8g01646 1371 NCBIfam ketose-bisphosphate aldolase 1095 1371 IPR000771 GO:0005975|GO:0008270|GO:0016832
Vimu8g01646 1371 Gene3D - 1 166 - -
Vimu8g01646 1371 SUPERFAMILY YgbK-like 693 1087 - -
Vimu8g01646 1371 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 168 296 IPR008927 -
Vimu8g01646 1371 Gene3D - 318 531 - -
Vimu8g01646 1371 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 534 638 IPR008927 -
Vimu8g01646 1371 Pfam Sugar-binding N-terminal domain 693 893 IPR010737 -
Vimu8g01646 1371 ProSitePatterns 3-hydroxyisobutyrate dehydrogenase signature. 327 340 IPR002204 GO:0016491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01646 - - gmx:100779987 2262.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01646 8 22286438 22311304 Vimu8g01646 8 22286438 22311304 ECH