Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01645 ATGGCGGATCAGAGCCCCAAACCAGAGACCTTCGAGCTCAGCAATGGCAACATGAAGATTCTCCTCACCAATCTCGGATGCACCATCATCTCCTTATCTGTTCCCGGAAAAGATGGGGTGTTATCCGACGTCGTTCTCGGCCTCGACTCTGTTGAATCCTATGAGGTCCCGTTTAATTTTGCGATTTCTTTGATTGAAATTCTGGCCTCAATCCTTCGGGAATTTATGATTGATTTACTGAATTATGTTGCTTGCAAGCAGAAAGGTCTTTCTCCATATTTTGGCTGCATTGTGGGTCGGGTTGCAAACCGAATCAAGGATGGCAAGTTTACACTTGATGGAGTTCAGTACTCTTTGCCTCTGAACAAACCCCCAAACAGTCTCCATGGTGGAAATGTTGGGTTTGATAAGAGGGTATGGGAGGTAGTTGAACATAAAAAAGGAGAAACTCCTTCAATCACTTTCAAGTATCACAGTCAAGATGGAGAAGAAGGTAGTCTATTGTTTTCTGTTGTACAAGGTTATCCTGGGGATATCACTGTTACAGCCACATACACGCTCACCTCAAACACAACTCTAAGGCTTGACATGGAAGGAGTGCCAAAGGACAAACCCACCATAGTTAACTTAGCTCAGCACACCTACTGGAACTTAGCTGGTCACAACTCAGGGAATGTACTTGACCATTCAATTCAGATATGGGCTAATAATATCACTCCTGTAGATGAGAATACTGTGCCGACCGGTGAAATCATGGCAGTGAAGGGTACCCCTTTTGATTTTACATCTGAGAAAAGAATAGGGAACAATATTAGTGAAGTTGGATTGGGATATGACCACAATTTTGTGCTGGATTGTGGAGAAGAGAAAGATGGTTTGAGGCATGTTGCAAAAGTGAGGGATCCATCAAGTTCAAGAGTACTTAACTTGTGGACAACTGCCCCTGGTGTGCAATTTTACACTGGAAACTATGTTAATGGTGTTAAAGGAAAAGGAGGTGCCATATATGAAAAACATGCAGGATTATGTCTGGAGACACAAGGATTCCCTAATGCTATAAACCAACCAAATTTTCCATCTGTTGTGGTTCGTCCGGGAGAGAAGTATAGACACACGATGTTGTATGAGTTTTCAATTGAGTGA 1143 0.4278 MADQSPKPETFELSNGNMKILLTNLGCTIISLSVPGKDGVLSDVVLGLDSVESYEVPFNFAISLIEILASILREFMIDLLNYVACKQKGLSPYFGCIVGRVANRIKDGKFTLDGVQYSLPLNKPPNSLHGGNVGFDKRVWEVVEHKKGETPSITFKYHSQDGEEGSLLFSVVQGYPGDITVTATYTLTSNTTLRLDMEGVPKDKPTIVNLAQHTYWNLAGHNSGNVLDHSIQIWANNITPVDENTVPTGEIMAVKGTPFDFTSEKRIGNNISEVGLGYDHNFVLDCGEEKDGLRHVAKVRDPSSSRVLNLWTTAPGVQFYTGNYVNGVKGKGGAIYEKHAGLCLETQGFPNAINQPNFPSVVVRPGEKYRHTMLYEFSIE 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01645 380 CDD galactose_mutarotase_like 11 377 IPR047215 GO:0016853
Vimu8g01645 380 SUPERFAMILY Galactose mutarotase-like 9 54 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vimu8g01645 380 Pfam Aldose 1-epimerase 91 375 IPR008183 GO:0005975|GO:0016853
Vimu8g01645 380 SUPERFAMILY Galactose mutarotase-like 90 378 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vimu8g01645 380 Gene3D - 2 380 IPR014718 GO:0030246
Vimu8g01645 380 PIRSF GALM 2 62 IPR015443 GO:0016853|GO:0019318
Vimu8g01645 380 PIRSF GALM 76 380 IPR015443 GO:0016853|GO:0019318
Vimu8g01645 380 PANTHER ALDOSE-1-EPIMERASE 8 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01645 Vimu-Chr8 22282072 22284532 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01645 7 378 Miscellaneous Gene Families AT3G47800 44.624 1.47e-102 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01645 K01785 - gmx:100776238 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01645 8 22282072 22284532 Vimu8g01645 8 22282072 22284532 ECH