Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01642 ATGTCCGTCGAACTCAAGCTCTCTCGTTCTAATCGTATCTATCGCCCTTCGGAAGCTCTGGAAGGCAAAATCGTTTTCAAAACTCAGTCTTCAATTTACCACTATGGAATTCGCCTCACTGTCAAAGGATCCGTCAACTTGCAGGTTCGTGGAGGATCAGCTGGGGTTGTTGAATCGTTATACGGCGTTATTAAGCCTATCCCAATTGTGAACAGGATTACTGAGATAAAATCTTCTGGAAAGATTGGTTTGGGTACATCAGAGATACCATTCTCGTTGAAGCTACGGCAGCAGGATGAAAATTTAGAAAGATTTTATGAGACGTTCCATGGTGCAAATATAAGCATCCAGTATTTGGTGACTGTAGATATACCTCGTGGATACTTGCATAAATCATTATCAGCAACAACAGAGTTCATAGTTGAAAGTGATAAAGCTGATCTTCCACAAAGACCACTTTCTCCAGAGATGGTAATCTTTTACATCACCCAAGACACTCAAAGGCATTCTCTACTCCATGAATTAAAATCTGGTGGATTTCGGGTGACAGGAAAAATCTCAACTCAGTGTTCTTTGTCTGGTACTATTAGTGGTGAGGTAACTGTAGAAGCTTCTGCAGTTCCAATTCAGGCAATAGACATTCAGCTGTTTCGAGTTGAATCCATTCTTCTTGGGGAGAAAATTGTGACTGAAACCTCTCTGATTCAAACAACACAGGAAAGTGATGGTGAATTTGTGTTGTATTGGAGTCCCTTCTCAATTGAGTTCAAAGTTGCAATTGTTATAAGCTTTCAGTCAGAGCTAAGTAAATTGCATAAGAAATCTGACCCCAAAACTCCAAGACTATGGATGGCGATGGAAACATTACCACTTGAGTTGGTTAGGGCAAAGTAA 894 0.4049 MSVELKLSRSNRIYRPSEALEGKIVFKTQSSIYHYGIRLTVKGSVNLQVRGGSAGVVESLYGVIKPIPIVNRITEIKSSGKIGLGTSEIPFSLKLRQQDENLERFYETFHGANISIQYLVTVDIPRGYLHKSLSATTEFIVESDKADLPQRPLSPEMVIFYITQDTQRHSLLHELKSGGFRVTGKISTQCSLSGTISGEVTVEASAVPIQAIDIQLFRVESILLGEKIVTETSLIQTTQESDGEFVLYWSPFSIEFKVAIVISFQSELSKLHKKSDPKTPRLWMAMETLPLELVRAK 297
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01642 297 Gene3D - 183 249 IPR014752 -
Vimu8g01642 297 SUPERFAMILY E set domains 3 172 IPR014756 -
Vimu8g01642 297 FunFam Down syndrome critical region protein 3 1 144 - -
Vimu8g01642 297 Gene3D - 1 144 IPR014752 -
Vimu8g01642 297 PANTHER VACUOLAR PROTEIN SORTING 26 RELATED 10 246 IPR028934 GO:0006886
Vimu8g01642 297 Pfam Vacuolar protein sorting-associated protein 26 9 246 IPR028934 GO:0006886
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01642 K25730 - gmx:100820593 479.174
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01642 8 22267453 22271552 Vimu8g01642 8 22267453 22271552 ECH