Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01614 ATGTCGTTGTTGAAAGTTTGGGGGCGTGTATTTACCAATGTGCATGAAGTTCTCACACATGTGACTTCCATGATGCCAATTGTTGCAAGTGCTGCCTTTGTAGATTCAATTCAAACAGCATTTCAAGGTGTTGCCAGAGGATGTGGTTGGCAGAAACTTGGTGCATATATCAATCTAGGATCTTGTTATATTTTGGGTGTTCCTTTTTCTGTTGTCTCATCTTTTGTATTCCACTTGAAGGGACAGGCAGAAAGGGCAGTTGCAAGAGTAAGAAACAGTGGAGCCAAAGTTGAGGACCAAAATGTTAATGTTGCTTCATAG 321 0.4112 MSLLKVWGRVFTNVHEVLTHVTSMMPIVASAAFVDSIQTAFQGVARGCGWQKLGAYINLGSCYILGVPFSVVSSFVFHLKGQAERAVARVRNSGAKVEDQNVNVAS 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01614 106 PANTHER MULTIDRUG RESISTANCE PROTEIN 4 81 - -
Vimu8g01614 106 Pfam MatE 4 71 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01614 Vimu-Chr8 22004305 22005902 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01614 K03327 - vum:124833005 163.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03481 3 47719631 47724776 Vimu8g01614 8 22004305 22005902 ECH
Vimu3g03484 3 47731067 47733600 Vimu8g01614 8 22004305 22005902 ECH
Vimu8g01614 8 22004305 22005902 Vimu8g01614 8 22004305 22005902 ECH