Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01581 ATGCTTCTTAATCACATTGCCGTCGGATTCTGTTGGGTCGACCCGCAACAACCCGACCGGAACCACGAAACCCGACTCACTTCCTATCGTTTCCATCGCCAGCGGGTGACGCCGCCGAGTGCGGCGTTCCAAGGCGTGCGAATGGAGAAGAATGGCCGCCAACGGCGATCGATATGCACCGCCGACGAGCTTCACCGCGTCGTGGTTTCGAACTCCGATTGGAAGCTCGCTCTGTGGCGCTACCTTCCTTCTCCCGAGGTTCCCCTCTTCTCAAGTTCTCAAATTTTTGCTTTCTGTGAATACCCTTTTGGCAATGCACTGATGTATAACTTCCGGGCACCGTTGAGGAATCACCCGCTTTTGTTGTTGTCAGGGGTTGCTACCAATGCAATTGGCTATGATCTCTCTCCTGAGTCTAGGATAATGTTAAAGGATATGTTTGATGAGTATACGTTCTTCATGTTCAGTCTTCATTTGCTCGGTACATGTCGGCACAAGGTTTTGATACGTGGATTCTTGAGCACTATTGGAGATAGCTTGGAGGAAAATGAGGAATGCCTAAAGAATTTGTCTGAGATTGATTCTGCTATTAGTGATGAAATTGGTAAAAACAGATTAATGAGACTTGAGAACCTTGGCTCTCCCGAAGTTACAACTAAATTTGAGGAAATGAGGTTAACAAGGAGTTTCATGGACATTTTTACAAGGATATCTGAAAAGCTTGCAGGCTTTCTGAATCCTGATTCGTTGAAGGGAGGAAAGAACTCTGCACTCGTTAGTCAAATCAAGGATTTCAATCGGAGACTTCGAGCTATTATTGAAGGTCAACAGTTGTTCCCAGCACAGATTTTAGAACTGCAAGACCGATTTTCTGCCACTCTAGAAGAGTTTCAGAAACAGCTTCAGTTGATTGTTAAGTATGATTGGGACTTTGACCATTATCTGGAAGAGGATGTACCTGCAGCGGATTCTGGCTTGGCATCTGTTGTTACTTTGGCATCGTCACTTGACTATACCCCTTCAAAATCATCTCTCAAGTTGCTTTTACCCCTGGCAAGTGCAGAACCTGCTCAGGCTTTGAACATTCCTGCTATTCCAGTTGGGCCATTGATGGCCACTGTTTATCCCCTTGCAAGCTACCCTCCGTATGTTTTATCTTGGCTGAATTCTCAGATTTCAGCTCAAGATATGATGGATCAAAAACTGTTTGAGAAGCTTGTTTTGAATAACTTCTGTACCATACCTTCCAAGATTCTGTTGCAGTTATCATCAGTTTTCCAAGAAGGTGGTCTACGTGACAGGAGTGGAACATTCTTCTACAAGGACCATATCTGCAAAATTGATGTTCCTGTCTTAGCCGTCGCCGGTGACCAAGACTTGATCTGTCCTCCCGAAGCTCTTATTCCTGAAGATTTGATTACATACAAAGTCTTTGGGGAGCTTGATGGTCCACACTATGCCCACTATGACTTAGTGGGTGGTCGTCTGGCTGCAGATGAACTGTATCCATGTATAACTGAATTTCTCAGTCAACATGACATGGCTTAG 1548 0.4503 MLLNHIAVGFCWVDPQQPDRNHETRLTSYRFHRQRVTPPSAAFQGVRMEKNGRQRRSICTADELHRVVVSNSDWKLALWRYLPSPEVPLFSSSQIFAFCEYPFGNALMYNFRAPLRNHPLLLLSGVATNAIGYDLSPESRIMLKDMFDEYTFFMFSLHLLGTCRHKVLIRGFLSTIGDSLEENEECLKNLSEIDSAISDEIGKNRLMRLENLGSPEVTTKFEEMRLTRSFMDIFTRISEKLAGFLNPDSLKGGKNSALVSQIKDFNRRLRAIIEGQQLFPAQILELQDRFSATLEEFQKQLQLIVKYDWDFDHYLEEDVPAADSGLASVVTLASSLDYTPSKSSLKLLLPLASAEPAQALNIPAIPVGPLMATVYPLASYPPYVLSWLNSQISAQDMMDQKLFEKLVLNNFCTIPSKILLQLSSVFQEGGLRDRSGTFFYKDHICKIDVPVLAVAGDQDLICPPEALIPEDLITYKVFGELDGPHYAHYDLVGGRLAADELYPCITEFLSQHDMA 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01581 515 SUPERFAMILY alpha/beta-Hydrolases 325 512 IPR029058 -
Vimu8g01581 515 Gene3D alpha/beta hydrolase 314 513 IPR029058 -
Vimu8g01581 515 PANTHER LYSOSOMAL ACID LIPASE-RELATED 326 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01581 Vimu-Chr8 21714180 21718483 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01581 - - gmx:100808317 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01581 8 21714180 21718483 Vimu8g01581 8 21714180 21718483 ECH