Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01576 ATGGCGAACGATACATCATCTGATTCTGATAATGAAATTATCGGAGCACGAGTAAAGCTCTTTGGACATGAAAAACCGATACATCAAGTTCTTGGAGGAGGAAAAGTGGCAGATATACTGTTATGGAGGGACAGAAATTTATCAGCTGCGCTTTTGGGAGGGATGACAGTGATATGGTTTCTATTTGAGATTGTTGAGTACAATTTCGTGACTCTCCTTTGTCACATTTCCATCACCACCATGCTTGTGCTATTCATATGGTCCACAGCTGCAGATATATTCAAATGGAAACCACCCCAGATTCCAGATATTATTTTACAAGAATCTTTCTTCCAAAGTCTTGCTTACATTCTCCACAGAAGATTCAACCAGTTACTACCAATGCTCCTCCATATTTCATGTGGAATAGACCTTCCAATCTTTCTTCTGAACATTGTGTCCCTCTATATTTTCTCAGTGATTGGAAGCTACTTCAGCTTTGTCAATCTGCTATATATTGGTTTCCTGTGCGTGCACACGCTGCCAATTGTGTATGAACGATATGAGGAAGAAATCAACAATTGGGTGAGCGATATTATAATCGTTCTCAGAAAAAACTACAGGAGTTTTAAGAAGAACTACCTCAACAGAATTCCCAGAGGACCAGTGAAGCCAAAGAAAACCCAATAA 669 0.3946 MANDTSSDSDNEIIGARVKLFGHEKPIHQVLGGGKVADILLWRDRNLSAALLGGMTVIWFLFEIVEYNFVTLLCHISITTMLVLFIWSTAADIFKWKPPQIPDIILQESFFQSLAYILHRRFNQLLPMLLHISCGIDLPIFLLNIVSLYIFSVIGSYFSFVNLLYIGFLCVHTLPIVYERYEEEINNWVSDIIIVLRKNYRSFKKNYLNRIPRGPVKPKKTQ 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01576 222 PANTHER RETICULON 19 212 - -
Vimu8g01576 222 Pfam Reticulon 36 190 IPR003388 -
Vimu8g01576 222 ProSiteProfiles Reticulon domain profile. 36 222 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01576 Vimu-Chr8 21541046 21542628 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01576 - - pvu:PHAVU_004G154000g 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01576 8 21541046 21542628 Vimu8g01576 8 21541046 21542628 ECH