Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01572 ATGTTGGGGACGGCTTTGCAATTTGGAGGTGTTCGTGGTGATGATCACTTTTACATTCCGGTGAAGGCAAGGAAGAACCAGAATCAGCGTAAACTGGTTCAAAGAGAGAAGGGTGGTGAAACTGAGAGTGCTGATTCAATTTCAGAGAGGGAACTTATTGCTTCTGAGAATGGGAATCCCAAGGAGTCTTCATACTTATTGAGCAAACCATCTTCTTGCTCTTCTGTAGAGCCTGCTAGTAACATTGATCGGTTTCTGGGGTCCACAACTCCTTTAGTCCCAGCTCAATATTTAGCTAAGACAACAATGAGAGGTTGGAAGACTTGTGATGTAGAGTATCAATCTTACTTTGCCCTAAATGATCTCTGGGAATCGTTTAAGGAGTGGAGTGCATATGGAGCAGGAGTCCCTCTGGTACTTGATCAAAGGCAATCTGTTGTCCAATACTATGTTCCTTATTTGTCGGCTATTCAGCTATATGGTCAATCAGACAGGAAGTCAAATACTAAGTCAAGGTACACCAGTGAAGACAGCGATGGTGATTATTACAGAGATTCAAGTAGTGATGGAAGCAGTGACAGTGAAGTTGGAAAAAGGACTGAACTTTTTGTAGCGCAAGGAAATGGTCAACATTATAAAGGTGACGTTTCGATTCAAATGAGCAGGCTATCTGTACATGATAAGCGCAATAGAATGCAAGAGGGATTTTCTAGCGATGATAGTGAAACTGGGAATTCTCAAGATCTTCTTTTTGAGTATTTTGATCACGATCCTCCTTATAGTCGTGAGCCATTGACTGACAAGATACTTGATCTTGCACGGCACTATCCTAGCCTCAAGTCACTGAGAAGCTGTGATTTATTGCCAGTTAGTTGGATGTCTGTAGCATGGTATCCTATATATCGAATACCCACTGGTCCAACATTAAAAGATTTAGAGGCCTGCTTTCTTACATACCATACACTGCATACACCCTTGGCAGGAAATGGAGGCACCCAGGGTCCAATTTTGGTTTATCCAAAAGACGTGGATGGTGTACCAAAGATTTCCTTACCAACTTTTGCAATGGCTTCCTACAAGTTAAAGGGGTCTATATGGACACAAAATGGAGATGCAGATAACTGGTTACGACAGCTTCAAGTGAATCACCCAGATTATCAGTTCTTCAAATCACATGGCACATACCACAGATTGATGGGTTTGGCACTTCTAATGTGGATTCCTCTTCCTGTTACCCAAGCTTAA 1245 0.4209 MLGTALQFGGVRGDDHFYIPVKARKNQNQRKLVQREKGGETESADSISERELIASENGNPKESSYLLSKPSSCSSVEPASNIDRFLGSTTPLVPAQYLAKTTMRGWKTCDVEYQSYFALNDLWESFKEWSAYGAGVPLVLDQRQSVVQYYVPYLSAIQLYGQSDRKSNTKSRYTSEDSDGDYYRDSSSDGSSDSEVGKRTELFVAQGNGQHYKGDVSIQMSRLSVHDKRNRMQEGFSSDDSETGNSQDLLFEYFDHDPPYSREPLTDKILDLARHYPSLKSLRSCDLLPVSWMSVAWYPIYRIPTGPTLKDLEACFLTYHTLHTPLAGNGGTQGPILVYPKDVDGVPKISLPTFAMASYKLKGSIWTQNGDADNWLRQLQVNHPDYQFFKSHGTYHRLMGLALLMWIPLPVTQA 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01572 414 PANTHER T15D22.8 20 393 - -
Vimu8g01572 414 MobiDBLite consensus disorder prediction 169 196 - -
Vimu8g01572 414 Pfam Protein of unknown function (DUF789) 80 389 IPR008507 -
Vimu8g01572 414 MobiDBLite consensus disorder prediction 28 52 - -
Vimu8g01572 414 MobiDBLite consensus disorder prediction 165 196 - -
Vimu8g01572 414 MobiDBLite consensus disorder prediction 29 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01572 Vimu-Chr8 21498024 21501852 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01572 - - gmx:100775751 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01572 8 21498024 21501852 Vimu8g01572 8 21498024 21501852 ECH