Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01512 ATGAACAGGAGAAGCGGTGCAAATATGGTTCGGCGCAAGCGTTGGAGGCATTCACCGGAAAATTCTCCGTCAAAACGAAGAAGACGATCTCAGTTTGAATGTCGGAGTAGGAGATGGATTGTCTCTTCCAAAGACTCTTCCAGTTGCACGGGCCACGATTGCGGAAGCTCTCCTCCAGAAAATTTAAGCACTTGTTATTCGTCAAAGCAGAAAACACCTCAGTTGGAATCTCCCTGTTTTGCCAGGAGATGGGTTTTCTCTTCTAAAGATTGTTCTAATTGCATGGGTCAGAATTCAGAATTACGAGATAAGATTGTGGTTGTTTCATACAATATACTTGGTGTTGAAAATGCATCAAATCATCCGGATCTGTATTCTAATATTCCACATAGGTTCTTGGAGTGGGACAAGCGGAAAAGGCTCATACTTGAAGAGATTAACAACTATAATGCCAGCATACTGTGTTTCCAGAAGGGAGTTAGAGACTTTGCTGTAATTGTTGACCGGTTTAGTTACCTGGTGAGGGAGGTTAAGCTCCCGGAACAGTATTTAGGAATTCTTACCCGAATACCTAACAAAGTGGTCCAACCTGTCGGATCCAATCGAAAGGAGAAGAGAGCATTGTTTTTTGCTGATGAAGTAACCTGCCAAGAACACCTAGATACTATCGGGGGAGCGATGATGAATGGATTACGAGAGTCTTTTCGCATAATTGACACATTGAGCACGGGAAATGATTATATTGCATTGGTGGAGAATTTGAGGTGTAGAAGGCTGGAAGTTAATAGAATCCAGAAAGAATGGAAGACATCAGAAGAGGATTTGCCACCACCCAAGCCTCCGAACATGAATTGGAGGGTGCCACCTAAGAAGAGGAGCATTATATCCAATAACAATTTCCTAACTTCAACCTTGGGGACAAGGTTGATTCTCAAGGGGGAGGCCTATATAAGGATCCTTTGTTTGTTTCAGAAGGGAGTTAGAGACTTTGCTGAGGTTGATCATTTTAATGATCTAGACAATCTTTTCCAGAACAGTGGCTTTAAAGGTACTTATAAGGCTCGCACTGGGGAAGCAAAAGATGGATGTGCTGTATTTTGGAAAGACAAGTTATTCAATCTTTTGCATCAAGAAGATATAGAGTTCCAAAGATTTGGCATGCGTAACAATGTTGCCCAGCTGTGTATTTTGGAGGAAAAAGAAGATTTGTTGTGGGAAACATACATGTGCTATTCAACCCAAATCGTGGTGACATCAAACTGGGTCAGACTTTTACTTGATAAAGCTTACAAGTTGTCACAAGAATGGGGCAACATCCCTGTTATTATTGCTGGGGATTTGAATAGTGTTCCACAGAGTGCCATATACAAGTTTCTGTCTTCGTCAAAGATGATGGGGGCACAGAAAGGGTATGAGGAAAAGGGGAACATATTCCCTTCTTTGGGATTAGACATCCAATTACATGATCGCCGAAATATGTCAGGACAGCTTGAAATCCAGTCCAACAGACTCTTCAGATCACAGATTCGTGATGATGCTAGCATTTCGATGACTCTGTCAAGGCAATTGCTATATAGATGGAGTGTGGAAGAACTAAGAATTGCAACAGGAGCAAAAGGAATCACTCAACTTCAGCACCAGCTCAAACTCCGCAGTGCTTATAGTGGTGTTCCTGGAGACCATAGAACAAGAGATGATATTGGGGAGCCCTTGGCAACATCATACCATTCCAAGTTCATGGGAACTGTTGATTATATCTGGCATTCCGATGATCTTGTTCCACTTAGAGTTCTTGAAACCTTGCCAATTGATATTCTTAGAAGATCTGGAGGACTCCCCAGTGAGAAATGGGGAAGTGATCACCTAGCTGTTGTATGTGAGTTGGCTTTTAGCAAACAACAACAATGTCTGAGGTCTGAACCTTAA 1926 0.4216 MNRRSGANMVRRKRWRHSPENSPSKRRRRSQFECRSRRWIVSSKDSSSCTGHDCGSSPPENLSTCYSSKQKTPQLESPCFARRWVFSSKDCSNCMGQNSELRDKIVVVSYNILGVENASNHPDLYSNIPHRFLEWDKRKRLILEEINNYNASILCFQKGVRDFAVIVDRFSYLVREVKLPEQYLGILTRIPNKVVQPVGSNRKEKRALFFADEVTCQEHLDTIGGAMMNGLRESFRIIDTLSTGNDYIALVENLRCRRLEVNRIQKEWKTSEEDLPPPKPPNMNWRVPPKKRSIISNNNFLTSTLGTRLILKGEAYIRILCLFQKGVRDFAEVDHFNDLDNLFQNSGFKGTYKARTGEAKDGCAVFWKDKLFNLLHQEDIEFQRFGMRNNVAQLCILEEKEDLLWETYMCYSTQIVVTSNWVRLLLDKAYKLSQEWGNIPVIIAGDLNSVPQSAIYKFLSSSKMMGAQKGYEEKGNIFPSLGLDIQLHDRRNMSGQLEIQSNRLFRSQIRDDASISMTLSRQLLYRWSVEELRIATGAKGITQLQHQLKLRSAYSGVPGDHRTRDDIGEPLATSYHSKFMGTVDYIWHSDDLVPLRVLETLPIDILRRSGGLPSEKWGSDHLAVVCELAFSKQQQCLRSEP 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01512 641 Gene3D Endonuclease/exonuclease/phosphatase 72 639 IPR036691 -
Vimu8g01512 641 MobiDBLite consensus disorder prediction 1 23 - -
Vimu8g01512 641 Pfam Endonuclease/Exonuclease/phosphatase family 350 621 IPR005135 GO:0003824
Vimu8g01512 641 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 47 158 - -
Vimu8g01512 641 MobiDBLite consensus disorder prediction 1 30 - -
Vimu8g01512 641 SUPERFAMILY DNase I-like 103 631 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01512 Vimu-Chr8 21070566 21077995 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01512 - - vra:106769764 513.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01512 8 21070566 21077995 Vimu8g01512 8 21070566 21077995 ECH