Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01502 ATGCATATTATTCTCTTGCTGTTTATTTCTAATCTTCCCAACATATTTTCACAAGACTCTAGCCCTTCAACCCCCACCATAGCTGAATGCACATCTAGCCTAATTCCCCTTATTCCTTGCACCCCATTTGTGCAGGGTAGTGACCCTTCTCCAGGGTTACTATGCTGTGACAACCTCAAACAGATCTACAGCCAAGAGCCACATTGCCTTTGCCTCTTGTTCAATGTTACTAACTTCAGTTCTCTTCCCATCAACAGGACACTTGCTCTGCAGTTACCAGCTCTTTGCAACCTTCAAGTTAATGCCAATATCTCCCTCTGTTTAGGTTGCATAAATAGTCACATTTAA 348 0.4253 MHIILLLFISNLPNIFSQDSSPSTPTIAECTSSLIPLIPCTPFVQGSDPSPGLLCCDNLKQIYSQEPHCLCLLFNVTNFSSLPINRTLALQLPALCNLQVNANISLCLGCINSHI 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01502 115 CDD AAI_LTSS 37 98 - -
Vimu8g01502 115 SMART aai_6 30 107 IPR016140 -
Vimu8g01502 115 Pfam Probable lipid transfer 21 103 IPR016140 -
Vimu8g01502 115 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 20 107 IPR043325 -
Vimu8g01502 115 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 29 110 IPR036312 -
Vimu8g01502 115 Gene3D - 26 103 IPR036312 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01502 28 103 Acyl Lipid Metabolism Gene Families AT1G73890 56.410 4.51e-20 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01502 - - gsj:114418601 166.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01502 8 20993292 20995830 Vimu8g01502 8 20993292 20995830 ECH