Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01472 ATGGAAGCTGCATTAAGCACTGCACTTGCTCTTTCACCTAACCAACTATTCAATGCAGTAAATCCTGGAGATAAAAACTTTGCTTTGAAATATTGCAAAGATCGTACTGTTGTAATGACAATGGCAGCCACTGGAATATTAGGAAAAGGTGGAGGGTTGATTGAGAGGCCAACCATAGAGACAACAACACCTGGAAGGGAATCTGAATTTGACGTAAGGAAATCGAGGAAAACATCTCCACCATTCCGAGTTTTGCTGCACAATGACAACTTCAACAAGAGAGAATATGTTGTGCAAGTGCTGATGAAGGTGATACCTGGAATGACAATTGATAATGCAGTTAACATCATGCAGGAGGCACATCATAATGGATTAGCAGTGGTTATCACATGTGCTCAAGTGGATGCTGAAGACCACTGCATGCAGTTGAGAGGAAACGGCCTTTTAAGCTCAATCGAGCCAGCTGATGGTGGTGGTTGCTGA 483 0.4286 MEAALSTALALSPNQLFNAVNPGDKNFALKYCKDRTVVMTMAATGILGKGGGLIERPTIETTTPGRESEFDVRKSRKTSPPFRVLLHNDNFNKREYVVQVLMKVIPGMTIDNAVNIMQEAHHNGLAVVITCAQVDAEDHCMQLRGNGLLSSIEPADGGGC 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01472 160 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTIC 25 160 IPR022935 GO:0006508
Vimu8g01472 160 FunFam ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 76 154 - -
Vimu8g01472 160 Gene3D - 76 154 IPR014719 -
Vimu8g01472 160 Pfam ATP-dependent Clp protease adaptor protein ClpS 77 145 IPR003769 GO:0030163
Vimu8g01472 160 SUPERFAMILY ClpS-like 76 153 IPR014719 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01472 Vimu-Chr8 20830916 20833973 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01472 K06891 - gmx:100306117 297.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01472 8 20830916 20833973 Vimu8g01472 8 20830916 20833973 ECH