Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01118 GAAGTTGGAAAAGCTGCTGATATTAGTGGGGATAGTGTGGTAGGTCTTGGTGCATATGACAAAACAGTGGAGGAGTGTGAAGGCAAAGGAAAGAAAGCAGAATGTGGTGGGAACATTGTGACTATTACTTCTGAGAATAGAGCAGAAGATGCGGCTGTTTTGAGTGTGGATGGTTCAAAAAGGGTTGGTGTTGAGGAAGCAAAAGACGGGGGAGGCAATGAAGAGGTAGAAAAAGACAAAGATTGTTCTGAGAACATTGTGACTATAGAGGTTCCAATTGCAGAGACAAGTGACAACATGGATGTAGACGTGGAGGACTTGAGTGATGAAGAGTATGGTTTTGCTGTTGGTGATTTTGTTTGGGGTCAAGCTGATAGTAAACTTTGGTGGCCTGGCCGAATTTATGACCCATCTGATGCATCTGATGACGCATTGAAGCTGAAACAAAAGAACAGACTTCTGGTTACCTACTTTGGGCATGGAACCTTTGCATGGTGTCATCCATCACAGTTAAAGCGTTTTGAGGATAACTTTGATGATATGGTTAAACAGAGTAGCTGCATCGATTTTGCCAATGCTGTTCAAGAAGCTGCAAGTGAGGTCGGAAGGCTTCTGTCTATGAAGCTGAGTCGTTTAGTCGTTGACAAGAAAATAGGTTCTGAATCTGAATCTACTGTCCTCTTTGTGAAAAATTCTGGAATCAAGGAAGGAGTTGTTGTGCCAGAAACTGGCATAGATAGACTTTTATATAGTCAATTTGAGCCAGCAGAATTACTTTCTCATGTGAATCGAATTGCACGAATTATTGATAGTGGAAGTAGTATTATGGAGTTGGAGATCTTAAAGGCTCGACTTTCTGCATATTATCTGTCAAAAGGGCATAAATTACCAGATTTTATGGATACCCAGCTGGTGCCTGGAGTTGGAGATAGTCCAATGGATGAAACAGTTGCTGTGGAGAACAGTAAAAGTACTGTGGAAGCCCCGACCCAAGGACCATTTGATGAGCTGGGTCATTCTCCAGGGCTTTCAGGGAGCATATCGAACCATGTAAGAAAGCAGAAAAGCATTGCTGAAATTATGAGGGAGGACAAAGATGTTCATACAGCAAGTAGGGAGGTGGAAGCAATTGGC 1134 0.4259 EVGKAADISGDSVVGLGAYDKTVEECEGKGKKAECGGNIVTITSENRAEDAAVLSVDGSKRVGVEEAKDGGGNEEVEKDKDCSENIVTIEVPIAETSDNMDVDVEDLSDEEYGFAVGDFVWGQADSKLWWPGRIYDPSDASDDALKLKQKNRLLVTYFGHGTFAWCHPSQLKRFEDNFDDMVKQSSCIDFANAVQEAASEVGRLLSMKLSRLVVDKKIGSESESTVLFVKNSGIKEGVVVPETGIDRLLYSQFEPAELLSHVNRIARIIDSGSSIMELEILKARLSAYYLSKGHKLPDFMDTQLVPGVGDSPMDETVAVENSKSTVEAPTQGPFDELGHSPGLSGSISNHVRKQKSIAEIMREDKDVHTASREVEAIG 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01118 378 PANTHER ALDOLASE-RELATED 45 368 - -
Vimu8g01118 378 SMART PWWP_4 114 175 IPR000313 -
Vimu8g01118 378 MobiDBLite consensus disorder prediction 323 349 - -
Vimu8g01118 378 Pfam PWWP domain 117 199 IPR000313 -
Vimu8g01118 378 CDD PWWP 117 200 - -
Vimu8g01118 378 ProSiteProfiles PWWP domain profile. 116 177 IPR000313 -
Vimu8g01118 378 SUPERFAMILY Tudor/PWWP/MBT 112 211 - -
Vimu8g01118 378 Gene3D - 105 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01118 Vimu-Chr8 18164028 18165163 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01118 - - pvu:PHAVU_004G012100g 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01118 8 18164028 18165163 Vimu8g01118 8 18164028 18165163 ECH