Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01048 CCAACTTTCTATAAAATTATAAAGCAGAAATCCTACATCGCTAAGGTATTGAACTGTGCGTTTTGGGTGTTCTATGGATTACCATTTGTGCACCCAAACAGTCTTTTAGTGGTGCATGGCGTTCGACTTGTTTTCGAGTTCGTCTATCTTGCCATATTTTTCATCTTTGCAACCAATAAAGGACCGGTGCGTATGCTTTCTCTTTTATCATCTTATTCTTCCTTTACTTCAGAAAAAGGTGCCGAAAAAGGTGTCGATTTTACTTCTGATCGAGGCTATTTTCTTTGCTGGAATCATTCTTATAACACTGCTGGCACTGCATGGCACTCAGCGAAGATCGTTGATTGTTGGTATAATCTGCGATGTCTTCAACGTGATGATATCAGTAACAGCATTGGCGCAGTCTCTGGACTGGTTCAGCTAATCTTGAATGCTTGCTACTGCTGCAGAGGAGAAAACAAAGATGATGGTGATCAGCACAACTCAACTGAGGTTCAACTCTCCGAACACCGCCGAGATGTTGAAGCTTGA 531 0.4181 PTFYKIIKQKSYIAKVLNCAFWVFYGLPFVHPNSLLVVHGVRLVFEFVYLAIFFIFATNKGPVRMLSLLSSYSSFTSEKGAEKGVDFTSDRGYFLCWNHSYNTAGTAWHSAKIVDCWYNLRCLQRDDISNSIGAVSGLVQLILNACYCCRGENKDDGDQHNSTEVQLSEHRRDVEA 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01048 176 PANTHER RAG1-ACTIVATING PROTEIN 1 1 69 IPR047664 -
Vimu8g01048 176 MobiDBLite consensus disorder prediction 156 176 - -
Vimu8g01048 176 Pfam Sugar efflux transporter for intercellular exchange 10 60 IPR004316 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01048 Vimu-Chr8 17662938 17663620 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01048 1 64 Miscellaneous Gene Families AT5G62850 54.054 1.02e-15 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01048 K15382 - gmx:100791284 135.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01048 8 17662938 17663620 Vimu8g01048 8 17662938 17663620 ECH