Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00982 ATGGAGAACTCGGAGAAGGTGGTGGCTGTGATCATGGTGGGTGGGCCAACCAAAGGGACCAGATTTCGACCTCTTTCGTTCAATATTCCCAAACCCCTTTTCCCTTTGGCTGGCCAGCCAATGGTTCACCATCCTATTTGTGCTTGCAAAAGGATACCCAATTTGGCTCAAATATATCTTATTGGATTCTATGAGGAGCGAGAATTCGCTCTTTATGTCTCTTCAATCTCAAATGAGCTGAAATTACCAGTAAGATATTTGAAAGAAGATAAACCGCGTGGTTCAGCAGGTGGCCTTTATTACTTTAGAGATATTATCATGGAAGACAGCCCATCACATATATTTCTGTTAAACTGTGATGTTTGCTGCAGTTTTCCACTGCCAGCAATGCTTGATGCCCATAAAAGATATGGTGGGATGGGGACAATGTTGGTGATCAAGGTTTCAGCTGAATCTGCTAACCAGTTCGGTGAGTTGGTTGCTGATCCAACCACTAATGAGTTGCTGCATTATACTGAGAAACCTGAGACATTTGTCAGCAATTTGATAAATTGTGGTGTGTACGTTTTCACCCCTGATATTTTTACTGCAATCGATGATGTATATATTAATCGAGAAGGCATAGCTAATCTACGTCGTCTCTCCAACTTTGAAACACTCCAATCTGCCTCAAGGAATATTCCAGCAGATTTTGTAAGACTGGATCAGAATATATTATCACCTCTAGCTGGGAAGAAGCAATTATATACATATGAGACAATGGATTTCTGGGAGCAAATTAAAACTCCAGGAATGTCATTGAAATGCTCAGAATTGTATCTTGCTCAATTCCGGTATACTTCACCTGATCTTTTGGCCAGTGGAGATGGTATTAAGAGTGCAACAGTTTCTGGCAATGCATATATTCATCCCTCTGCAAAAGTTCATCCATCTGCGAAGATTGGACCCAATGTTTCTATCTCAGCAAATGTTCGTGTAGGTGCTGGCGTCAGGTTAAGTGGTTGTATCATCTTGGATGATGTTGAAATTATGGAAAATGCTTTTGTCACAAACTCGATTATTGGATGGAAGTCATCACTTGGAAGATGGTCACATGTACAGGCTGATGGGGAAGCTGTAACTGTTGAAGATGAAGTGGTAGTATTCAACTGCATTGTTCTTCCCAACAAAACTCTTAATGTCAGTGTGCAAGAAGAAATCATCTTGTAA 1209 0.4078 MENSEKVVAVIMVGGPTKGTRFRPLSFNIPKPLFPLAGQPMVHHPICACKRIPNLAQIYLIGFYEEREFALYVSSISNELKLPVRYLKEDKPRGSAGGLYYFRDIIMEDSPSHIFLLNCDVCCSFPLPAMLDAHKRYGGMGTMLVIKVSAESANQFGELVADPTTNELLHYTEKPETFVSNLINCGVYVFTPDIFTAIDDVYINREGIANLRRLSNFETLQSASRNIPADFVRLDQNILSPLAGKKQLYTYETMDFWEQIKTPGMSLKCSELYLAQFRYTSPDLLASGDGIKSATVSGNAYIHPSAKVHPSAKIGPNVSISANVRVGAGVRLSGCIILDDVEIMENAFVTNSIIGWKSSLGRWSHVQADGEAVTVEDEVVVFNCIVLPNKTLNVSVQEEIIL 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00982 402 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 276 IPR029044 -
Vimu8g00982 402 FunFam Mannose-1-phosphate guanyltransferase alpha 6 277 - -
Vimu8g00982 402 SUPERFAMILY Nucleotide-diphospho-sugar transferases 7 356 IPR029044 -
Vimu8g00982 402 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 8 402 - -
Vimu8g00982 402 Gene3D Hexapeptide repeat proteins 287 399 - -
Vimu8g00982 402 Pfam Nucleotidyl transferase 9 202 IPR005835 GO:0009058
Vimu8g00982 402 CDD M1P_guanylylT_A_like_N 9 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00982 Vimu-Chr8 16964343 16971491 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00982 K00966 - gmx:100782402 744.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g00982 8 16964343 16971491 Vimu8g00982 8 16964343 16971491 ECH