Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g04220 ATGGAGCTCTCTGCGCCCTTCAGATTTCGATCAAGGAACCTCAACTCACCCTTCACACACATACCCATCAGCCACCCTTTCAAGCATCCACCACCCTTTTCAACCAAGCTCGTTAACAAGCCCACAAATTCTACACTAACGGTGAGAGCATTGAGAAAGGCACCTATTGAAGGGCTTAGCGATGAATTGAACGCTATTGCACGTCGTAACCTTGACTTTGCTTACACTCGAAGAAGGGTTCGCGATGCTTTCACCGAGGTGCATCAGCAGCTGGATCATTGCTTGTTCAAGAATGCTCCTGCAGGGATCAGAACTGAAGAATGGTATGAAAGGAATTCAAGGGGATTAGAAATTTTCTGCAAAAGTTGGATGCCAAGGCCAGAGATTCCATTCAAGGCTTCTGTGTGTTTCTGTCATGGATATGGTGATACTTGCACCTTCTTTTTTGAAGGTATAGCCAGGAGAATTGCAGCAGCAGGCTATGCTGTCTTCGCAATGGACTATCCAGGTTTTGGTCTTTCAGAAGGCTTGCATGGTTATATACCAAACTTTGATTATCTGGTTGATGATGTTATAGAGCATTATACAAAAATTAAAGTCAGGCCTGATCTGAGAGACTTGCCTAGATTTATATTAGGGCAGTCAATGGGTGGAGCAGTTTCTCTTAAAGTTCATTTGAGGGAGCCAGATGATTGGGATGGAATGATACTTGTAGCTCCAATGTGTAAAATTGCAGATGACGTGTTACCATCAGATGCAGTTATGAAGGTGTTAACTGTTTTTTCTAAAGTGCTGCCAAAGGCTAAACTCTTCCCAAAGCAGGACCTAGATGAGCTCTTCTTCAGGGAACCGAGCAAAAGAAAATTGGTTGGTCTCAGCACCATTATTGGTTCTTCATGGAGCAGAAGATAA 912 0.4353 MELSAPFRFRSRNLNSPFTHIPISHPFKHPPPFSTKLVNKPTNSTLTVRALRKAPIEGLSDELNAIARRNLDFAYTRRRVRDAFTEVHQQLDHCLFKNAPAGIRTEEWYERNSRGLEIFCKSWMPRPEIPFKASVCFCHGYGDTCTFFFEGIARRIAAAGYAVFAMDYPGFGLSEGLHGYIPNFDYLVDDVIEHYTKIKVRPDLRDLPRFILGQSMGGAVSLKVHLREPDDWDGMILVAPMCKIADDVLPSDAVMKVLTVFSKVLPKAKLFPKQDLDELFFREPSKRKLVGLSTIIGSSWSRR 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g04220 303 Gene3D alpha/beta hydrolase 98 294 IPR029058 -
Vimu7g04220 303 PRINTS Alpha/beta hydrolase fold signature 225 238 IPR000073 -
Vimu7g04220 303 PRINTS Alpha/beta hydrolase fold signature 160 175 IPR000073 -
Vimu7g04220 303 PRINTS Alpha/beta hydrolase fold signature 211 224 IPR000073 -
Vimu7g04220 303 Pfam Serine aminopeptidase, S33 132 289 IPR022742 -
Vimu7g04220 303 SUPERFAMILY alpha/beta-Hydrolases 87 275 IPR029058 -
Vimu7g04220 303 PANTHER PHOSPHOLIPASE-RELATED 100 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g04220 Vimu-Chr7 40840326 40847642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g04220 52 302 Acyl Lipid Metabolism Gene Families AT1G77420 62.550 1.86e-118 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g04220 K18368 K01054 gmx:100807463 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g04220 7 40840326 40847642 Vimu7g04220 7 40840326 40847642 ECH