Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g04113 ATGTTCACGCCGCAGAAAAAGGTGTGGCCGAATGCCGCTGCGCCTTTCACGCAACACCGAGGCGGTGCTGCGACGGGTTCCGCCTCTGCGAAGGAAAAGTCAGTCGCCGACGGTCCGCCGCCGCCGCCGTTGGTGTCTCTGACCGAAACCACCGTAGCGGTGGGGTTCGACACGGGTAACGCGGAGGACTGGAGGCGGTTCACGGAGTTAGGGTTGCTGGATGAAAGTGTGATGCAGAGGAAGGACCATGAAGCGCTCGTGGAGAAGGTCTCGAGGCTCGAAAGAGAGCTTTTTGACTACCAGTACAACATGGGCCTGCTATTGATTGAGAAGAAAGAATGGAATTCAAAGTTTGACCAGCTGAGGCAAGAACTAGCTGAAACTGAGGAGATTCTAAAACGAGAACAGTCAGCACATTTTATTGCCTTGTTTGAAGTTGAGAAGCGAGAGGAGAATTTGAGGAAAGCATTGAGCACAGAGAGGCAATGTGGGGCTGATCTTGAGAGAGCTCTGCGTGCAATGCAAGAAGAGCATGCCCAAGTCAAGTCTAACTCCCATACAAAGCTAGCTGAAGCTAGTGCGTTGGTTGATGGAATTGAAGAAAAGTCTTCAGTGGTTGACAAGAAACTGCTTGATGCAGAGGCTAAGCTTGCTGAGGTGAACAGAAAAAATGCAGAGCTGGATATGAAATTGCAAGAGGTCGAGGCTCGTGAAAGTTTGCTTCAAAAGGAGCGTTTGTCTTTAGCTACTGATCGAGAATCATTTGATGCAACATTCTATAAAGAAAGGGAAGATTTGAAGGAGTGGGAAAGGAAGCTACAACAAAGAGAAAATATGCTATCCAGTGGTTGGCAAAATATCAGTGAGAAAGAAAAGAAGATAGTTGAAACCGAGAAGAACCTTAAACAGAAAGAAAGAGACCTGGAAGTGTTGGAGAAAAAGATTAATTCATCTAGTTCTTTATTGAAGGAAAAGGAAGCTGAGATTATTAGAAGAATAGCCAATATAAATGTGGAAGAGAAGAAAGTGGATTCTTTGAAGAGCACGCTGGAGATGAAAGAGAAAGAATTGTTTGCATTGGAATCAAAACTTAATTCTAGAGAAAGAGAGGGGATCCAGAAGGTCCTTGGTGAACAAAAGGCTACACTGGATTTGCAGTTGCAGCAGGTTGATTTTGAAATGGAACGCAAGCGGAAATCCCTTCTTGAGGAGTTTAGCAGCAAGGAGGAAGCCTTGGAGCAGAGGGAGGCTGAAGTCAACCATAGGGTAAAAAAGGTTGAAAAAGAAGAGCAAGCCTTGAGTAAGAAGGCTGAGAGAATAAAAGAACAAAGTAAGGAGATTGAAGCAAAATTGAAATCTTTAAAGGAGAAAGAAAAGACTCTTAAAATCAAGGAGAAAGAGTTGGAGAAGGAAAACCAACAATTGGTTGCTGATCGGGAGACCCTGGAGAATTTAAATGCTGAACTTCAGAGGATAAAAGCTGAGATTTCTCTGCAGGAGGAGCAAGTACACCAAGAGACTGAGAATTTGAAGCTTGCTGAGGATGATAGGTTAGAGAATTCTCGATTGCGATTGGAACTGAAACAGGAGATAGAGCATACCAGATTGCAGAAGGACTCTCTTGTGAAGGAAGCTGAAAACTTAAGGGAGGAGAGAGAGAGGTTTGAGAAAGAGTGGGAAGTACTAGATGAAAAGAGAGAAGAAATTACTAGGAAGCAGCATGATATTGATGTGGAGAAAGAAAGTTTAAGAAAATTTCAGAACAGTGAAGAAGAAAGATTGAAAAGCGAGAAACAAAGTATGCAAGAACAAAGAAAGAAAGAGCTGGAGAAGCTTGAATTGGAGAAGGAATCATTTAGAGATTCAATGAATCAAGAGAAACACCTGTTGTCTGAAAAGGTGAAAAATGAACAGGCTAAAATGCTTCAAGATTTTGAATCAAAGATGAGGAATCTTGAGAATGAAATCCAGAAAAGACAGGAAGAAATGGAGGAAGATTTGCAGGAAAGAGAGAGAAATTTTCAGGAGAAAATGCAAAGAGAACGAGACAATATTAACATATTGAAGAATCTTTCTGAGAAGGAATGGGAAGAAGCAAAGGCTGAGGGGATTAGATTAGAAAATGAAAGGAAGGAACTTGAATTGAACAAGCAGCAATTTCAGTCAGGCCAACTTGAGATGCGTGAAGATTCTGAAATGCTTATGAATCTCAGTCAGAAAGTTAAGAAAGAACGTCAACGCCTTGTGGCTGAAAGAAAAAATTTTCTTGAACTTGTTGAGAATCTGAAGAGTTGCAAGGTCTGTGGTGAAGTTGTTGGGAACTTTGTTTTATCTGATACTAAACTATCTGACTTGAAGGAAAGTGTGGCCATTCCTTTGCCTATTTCCCCTGTTCTGAATTTTAAGCCTCCAAACTCCCAGGACATTGTAGCTACATCTGACATTGACAATTCTGGATCTGTAAGACCTGTGTCTTGGATCAGCAAATGCAAATCCAAGATTTTCAAACTGTCCCCAAGTAAAAGAGCTGAAGCTATTAGTGCTTCAGACATGGCTGGGACATCACCCTCAGATGTGAATGATGGTGTAGACAAAGCAGATGAGCCTGCATCTCTTGCTAATATAGAAGGAGCTAGAGTTAGTCTTGATGAACGTCAACCAACAGTTGGGATGACATATCACTCTCTAAATACGCCACACCTCCAATCTGATAACATTGATAAAGAGGTTGGGGATGAACACTCCCTATCCATAGGTGAGCACAGCAGGGTTGATAGTGTGGTTGATGGAGATCGAGATGATTCTCAACAGTCTGTTCCAAAGCTTCACAGGGCCAGACCTGGGAGGAAAAGCAAATCTGGAATTGCTAGAACACGCTCAGTGAAGGCTGTTGTTGAAGAGGCCAGAGAGTTTCTAGCCAAAGAAAACAGTCCAGAAGACTCCAGTCACATTGAGAAAGCCAACACTGGAAGGAAGCGCCAACGGGCACAAACTTCTAGAGTTACAGAAAGTGAACAGACTGCCGGTGATAGTGAAGGGCAATCAGAGAGTATTACAGCTGGTGGGCGCAGGAAGAAGAGACAAACAGTTGCTCCGCCAGCTCAGGTTACTGGGGAGAAACGATACAATCTTAGGCAGCACAAGACTGCGGGCAAAGGTTCATCAAAACAGGCCTTACCAAATGCAACAAGAAGTGTGAGGAAAGAGGCTGTGGTGGAGGGGCAGATGAGCCCCGAAGTTGTTGAAACCTCATTAGCAGCTGATGACAATGTACAAGTACAAGACAAAAGCACGGTGCAGGTCACAACAACAAAAACTGTGGAAGTCTCAGATGAAAGAGTTGTTAGGTTTGAAGTACCAAGAGATATTGTTGATGACAATGGTGCTGCAGAGGAAAATGGTACATCAGAATATCGAGAGGAAGATGGAAGCACAATCCATGATGTTGAAAATGATGATGATGATGATTACGAAGATGAGGATGAGGAACATCTGGGTGAGGTGTCCACCGTAAAGAAGATCTTCAGATTTTTTACAACGTGA 3543 0.431 MFTPQKKVWPNAAAPFTQHRGGAATGSASAKEKSVADGPPPPPLVSLTETTVAVGFDTGNAEDWRRFTELGLLDESVMQRKDHEALVEKVSRLERELFDYQYNMGLLLIEKKEWNSKFDQLRQELAETEEILKREQSAHFIALFEVEKREENLRKALSTERQCGADLERALRAMQEEHAQVKSNSHTKLAEASALVDGIEEKSSVVDKKLLDAEAKLAEVNRKNAELDMKLQEVEARESLLQKERLSLATDRESFDATFYKEREDLKEWERKLQQRENMLSSGWQNISEKEKKIVETEKNLKQKERDLEVLEKKINSSSSLLKEKEAEIIRRIANINVEEKKVDSLKSTLEMKEKELFALESKLNSREREGIQKVLGEQKATLDLQLQQVDFEMERKRKSLLEEFSSKEEALEQREAEVNHRVKKVEKEEQALSKKAERIKEQSKEIEAKLKSLKEKEKTLKIKEKELEKENQQLVADRETLENLNAELQRIKAEISLQEEQVHQETENLKLAEDDRLENSRLRLELKQEIEHTRLQKDSLVKEAENLREERERFEKEWEVLDEKREEITRKQHDIDVEKESLRKFQNSEEERLKSEKQSMQEQRKKELEKLELEKESFRDSMNQEKHLLSEKVKNEQAKMLQDFESKMRNLENEIQKRQEEMEEDLQERERNFQEKMQRERDNINILKNLSEKEWEEAKAEGIRLENERKELELNKQQFQSGQLEMREDSEMLMNLSQKVKKERQRLVAERKNFLELVENLKSCKVCGEVVGNFVLSDTKLSDLKESVAIPLPISPVLNFKPPNSQDIVATSDIDNSGSVRPVSWISKCKSKIFKLSPSKRAEAISASDMAGTSPSDVNDGVDKADEPASLANIEGARVSLDERQPTVGMTYHSLNTPHLQSDNIDKEVGDEHSLSIGEHSRVDSVVDGDRDDSQQSVPKLHRARPGRKSKSGIARTRSVKAVVEEAREFLAKENSPEDSSHIEKANTGRKRQRAQTSRVTESEQTAGDSEGQSESITAGGRRKKRQTVAPPAQVTGEKRYNLRQHKTAGKGSSKQALPNATRSVRKEAVVEGQMSPEVVETSLAADDNVQVQDKSTVQVTTTKTVEVSDERVVRFEVPRDIVDDNGAAEENGTSEYREEDGSTIHDVENDDDDDYEDEDEEHLGEVSTVKKIFRFFTT 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g04113 1180 Coils Coil 398 516 - -
Vimu7g04113 1180 MobiDBLite consensus disorder prediction 845 866 - -
Vimu7g04113 1180 Coils Coil 696 716 - -
Vimu7g04113 1180 MobiDBLite consensus disorder prediction 891 1075 - -
Vimu7g04113 1180 Coils Coil 208 244 - -
Vimu7g04113 1180 PANTHER PROTEIN CROWDED NUCLEI 4 1 1164 IPR040418 GO:0005634|GO:0006997
Vimu7g04113 1180 Coils Coil 727 754 - -
Vimu7g04113 1180 MobiDBLite consensus disorder prediction 1048 1062 - -
Vimu7g04113 1180 MobiDBLite consensus disorder prediction 1000 1018 - -
Vimu7g04113 1180 MobiDBLite consensus disorder prediction 1120 1146 - -
Vimu7g04113 1180 Coils Coil 111 138 - -
Vimu7g04113 1180 MobiDBLite consensus disorder prediction 579 635 - -
Vimu7g04113 1180 MobiDBLite consensus disorder prediction 962 999 - -
Vimu7g04113 1180 Coils Coil 164 184 - -
Vimu7g04113 1180 MobiDBLite consensus disorder prediction 1120 1165 - -
Vimu7g04113 1180 MobiDBLite consensus disorder prediction 1 43 - -
Vimu7g04113 1180 Coils Coil 524 572 - -
Vimu7g04113 1180 Coils Coil 336 370 - -
Vimu7g04113 1180 MobiDBLite consensus disorder prediction 905 940 - -
Vimu7g04113 1180 Coils Coil 584 691 - -
Vimu7g04113 1180 Coils Coil 287 328 - -
Vimu7g04113 1180 MobiDBLite consensus disorder prediction 1147 1164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g04113 Vimu-Chr7 39638861 39646725 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g04113 - - gmx:100816589 1646.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g04113 7 39638861 39646725 Vimu7g04113 7 39638861 39646725 ECH