Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g04016 ATGAACGGGATGGAGTGCGCGGCGAAAGGGAGCGGAAAACGGTGCGGCGGTGCCGCCACGCGTCTGTGCACTCGCTGCGAAGCCGTCGCTTATTGCTCTCTTTCTCACCAGATTGCACACTGGAGTCGTCACAAACACGAGTGTGATAGGTTGCAACAACAGATGAAGAGTGTTGAAGTCCTCAACGATTTTCCCTTCACTTTCTCTCGCGAAGCCACGTTTCAGGTTTGTGTGAAGCACGAAGGTAGATGTTCATTTTTGAGCAACAGAGGTCTTCATAAAGTGGGAATGTGGATGCATGAATGCGGTTGTGGGGCGTCATCTGCTTCATTTGATTGTTTAGGTTTAAATAATGGTTGGGATCTCCCAAGTGTTTTATGTCCATGTGGGCCAAACTCTCTGGGATTAGAGCAATTGCATAGTTGGAGAGACTACTATAAGTGGAGAAGCATCCCACTAGACTCGCCTGTTGCTTTGCTTCTTCATTGGTTTGGTTTTGGCTCTTATTTTGTTTGCAGTCAAAATACAAGAGTGGGAGGCTTAATCCCCCCGCTACCTTCTCAGATTCCACCTACCACAATAAAATGTTTGCTTTCACCTGTAAAATCTGTAGGGGAATGGATCTTTGTCCCATTGCCGCTTACAATATATCATGCTGCTCGTCTTGTTGGAATTACAGTCTTGAATCCTGAAATCGATGAAAAGTTGTACATACATTACCTTGGACCTGAGAAAGAGTTGCTACAACTTGTTGTGTTTGGAGAATTACTGGCACTCTTCCCTGGTTTTCATGTTCATATAGAACTTGTTGGACCTGCAATTCCTCCTCAAAGGGATGGTGAGAAAATTCAAATTTCAAAGTATGCTTGTTGCAATGAAGATGAGTGTGAGTGCAAAATAGCAACTAAAAATACATATCCTGGAACAGATTCTGGTTCAGCAGTGACATTGCAGCTTTGGCGAGGATTCTATCATGACCGATATAGAGATATTGTTAAGGATTCCTTTCCTCACTTAATAGTTGCTCCAAATGGTGGCATTGCTGCTTATTCCAGTTGGTTACCATGTATTGAGTTAATTGAAAAGATTGGCGTCCCAGCTGTTTTTACTGATTATTGCGAGGAAGCATGTCATCTTGCAGCAAGTTGTATTAAGACTGTGTCTGACCGTCCTCCTAAATTGCCAGTATCTGTTCTTGTTAATGTACCAATTGGTTTTTGTTGTTACTGTGTTTCTAAGGTTTTAGTTTCTATCTGCTTAGCAGGGACCAATGTTGTATTGGCAGCCTATAGCCGTGGAAGACAGCGTGCTATTATTGCCCTGCTACTCTAA 1332 0.4324 MNGMECAAKGSGKRCGGAATRLCTRCEAVAYCSLSHQIAHWSRHKHECDRLQQQMKSVEVLNDFPFTFSREATFQVCVKHEGRCSFLSNRGLHKVGMWMHECGCGASSASFDCLGLNNGWDLPSVLCPCGPNSLGLEQLHSWRDYYKWRSIPLDSPVALLLHWFGFGSYFVCSQNTRVGGLIPPLPSQIPPTTIKCLLSPVKSVGEWIFVPLPLTIYHAARLVGITVLNPEIDEKLYIHYLGPEKELLQLVVFGELLALFPGFHVHIELVGPAIPPQRDGEKIQISKYACCNEDECECKIATKNTYPGTDSGSAVTLQLWRGFYHDRYRDIVKDSFPHLIVAPNGGIAAYSSWLPCIELIEKIGVPAVFTDYCEEACHLAASCIKTVSDRPPKLPVSVLVNVPIGFCCYCVSKVLVSICLAGTNVVLAAYSRGRQRAIIALLL 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g04016 443 Gene3D - 5 55 - -
Vimu7g04016 443 PANTHER ZINC ION BINDING PROTEIN 211 398 - -
Vimu7g04016 443 ProSiteProfiles Zinc finger MYND-type profile. 12 48 IPR002893 -
Vimu7g04016 443 Pfam MYND finger 14 48 IPR002893 -
Vimu7g04016 443 Pfam MSS51 C-terminal domain 213 389 IPR046824 -
Vimu7g04016 443 SUPERFAMILY HIT/MYND zinc finger-like 14 53 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g04016 K24081 - gmx:100808017 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g04016 7 37972727 37976440 Vimu7g04016 7 37972727 37976440 ECH