Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03999 ATGTCTTCCAGGCGCCACTCCCTCGGCGGACCGCCGCCGCACACTGCCGCCGAGTCCGCTCAGAACCTCCGACAGCGAGTCATCACGTGCCTCAACAAACTCTCCGACCGCGATACACTCGCCGGCGCAGCCGCAGAACTTGAGTCCATCGCCCGAACCCTAAGCCATGACTCATTCTCCTCTTTCCTCTCCTGCATTCACAACACGGATTCTTCTTCCAAATCTCCTGTTCGCAAACAATGCGTTCATCTCTTAAACATTCTCTCGCGCTTCCATGGGGAAGCTCTCTCCTCGTTTCTTCCGAAGATGCTTGCAACTGTGCTCCGTCGCCTCCGTGACACCGACTCCGCCGTGCGATCCGCATGTGTGGACGCAGTCGCGGAGATGTCGACGAGGATCACGCGGCCGCCGTTCGCCACCGCGTTCCTGCGGCCGCTCATGGACGCGCTGGTGCAGGAACAGGATGCCAACACGCAGATCGGCGCCGCGCTGTGCCTCGCGGCGGCTGTCGAGGCGGCGCCGGACCCCGACGCGGAGGCGCTCCGGCGGAGCGCGCTGCCGCGGCTGGGGAAGCTAGTGAAGAGCGACGTGTGCAGAGCGCGGGCGGCGCTGCTAGTGCTGATCGGAAGCGTGGTCGCCGTCGGCGGTGCGTCGAGCCGTGGTGCGGTGAGCTGGCTCGTGCCGTGCCTGGTCGAGTTCCTTGGTAGTGAGGACTGGACGGTGAGGAAAGCCGCGGCCGAGGCACTGTTGAAGGTGGCTTCCGCAGAGAAAGACTTGGCCTCGCAGCACAAGGTTCTGTGTTTAGATTCGTTGCAGAATAGGAGGTTTGATAAGATAAAAGTAGTTCGAGAAACTATGAATCGTGCTTTGGAGACGTGGAGGGAGCTAACTGACGATGCTCCCGCGATTGTGAAGTCTGAATGTGATTCCGTCTGTGGCACAGATTATGGCAAAGGTCAGCGTGTCACTAAAAGTTCACCCAGTGTTGGCTCTAAGTCTTCTAAAACAATCCCTGCCAACAGGTCTCCTCCGTCTGGGGTTTCATTCATGTCCTCCACAAAAGGAGAAAATGTTCTAAAGAGTAATGAGAAGAGTTCAAGAATGGCAACATTGCATCAGCATGATGATGAGAAATCCTCAGTTGAGAAACTCGAAGGTCTGTTTTCGACGTCCTCCCACTCAAATATGTCTAAGGAAGATGCTATTAAAAGGTGCGATGTAGAACATTCTAGCCCAACCCCATATCAAAATGAAGCAAATTCAAGGGCAGAGATAAAGCGTGTTCTCTTTAGCAAGATGTCTGATGAAAAAGTGAAGAGATTCAGTGGTTCAAAATCTCGTGTGGTTCCATGTTACGATGACACAAATGTTGTAGACAACAGTGCAAATGATGTTTGTGACAATCCACAAGATGTTGAGGATTTTTCTTTGATTCGGGAACAACTTATTCAAATTGAAAACCAGCAATCAAATCTATTAGACACCCTTCAGAGATTTATTGGAAGCTCCCAAAGTGGTATAAATTCTTTGGAGTCACGAGTACATGGTCTAGAGATGGCCCTGGATGAAATTTCATATGATTTGGCAGTTTCAAGCGGCAGGTTTTCCTATACTGATGTAACAGATGACACCTGTTGCAAGCTACCTGGTACTGACTTTTTGAGTTCTAAATTTTGGAAGAAAACAGAAGGTCGGTATACCACATCAAAGTTCTCTTTAGGAAACATAGCATCAACAAATGGTTTGCATAATGGAACAACCAATAAAGATGGAGGTAAAGAAATATTAACTCCAAATAACAGTAGATTGCAACATGGTAAGGGTGGATATTTTGTGAACCAATTGGCTGAAGTTCAAAGCAATTTTAAAGGGCTTCATACGTATAAAATGTCTACAAACAGGGTCCAAGATGCCATGAGAGCACAAACTGATAATGCCAGCAGATATGGTGGCATTCACCCAGCTACTGGAGCACCGAGAAACCATAATGTCAGGTAA 1998 0.499 MSSRRHSLGGPPPHTAAESAQNLRQRVITCLNKLSDRDTLAGAAAELESIARTLSHDSFSSFLSCIHNTDSSSKSPVRKQCVHLLNILSRFHGEALSSFLPKMLATVLRRLRDTDSAVRSACVDAVAEMSTRITRPPFATAFLRPLMDALVQEQDANTQIGAALCLAAAVEAAPDPDAEALRRSALPRLGKLVKSDVCRARAALLVLIGSVVAVGGASSRGAVSWLVPCLVEFLGSEDWTVRKAAAEALLKVASAEKDLASQHKVLCLDSLQNRRFDKIKVVRETMNRALETWRELTDDAPAIVKSECDSVCGTDYGKGQRVTKSSPSVGSKSSKTIPANRSPPSGVSFMSSTKGENVLKSNEKSSRMATLHQHDDEKSSVEKLEGLFSTSSHSNMSKEDAIKRCDVEHSSPTPYQNEANSRAEIKRVLFSKMSDEKVKRFSGSKSRVVPCYDDTNVVDNSANDVCDNPQDVEDFSLIREQLIQIENQQSNLLDTLQRFIGSSQSGINSLESRVHGLEMALDEISYDLAVSSGRFSYTDVTDDTCCKLPGTDFLSSKFWKKTEGRYTTSKFSLGNIASTNGLHNGTTNKDGGKEILTPNNSRLQHGKGGYFVNQLAEVQSNFKGLHTYKMSTNRVQDAMRAQTDNASRYGGIHPATGAPRNHNVR 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03999 665 Gene3D - 13 403 IPR011989 -
Vimu7g03999 665 MobiDBLite consensus disorder prediction 1 21 - -
Vimu7g03999 665 ProSiteProfiles HEAT repeat profile. 226 264 IPR021133 -
Vimu7g03999 665 SUPERFAMILY ARM repeat 18 307 IPR016024 -
Vimu7g03999 665 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 21 580 IPR033337 GO:0005874|GO:0008017
Vimu7g03999 665 MobiDBLite consensus disorder prediction 319 366 - -
Vimu7g03999 665 Pfam HEAT repeat 226 253 IPR000357 GO:0005515
Vimu7g03999 665 MobiDBLite consensus disorder prediction 318 380 - -
Vimu7g03999 665 MobiDBLite consensus disorder prediction 645 665 - -
Vimu7g03999 665 FunFam ARM repeat superfamily protein 23 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03999 Vimu-Chr7 37778872 37782116 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03999 - - gmx:100781440 986.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03999 7 37778872 37782116 Vimu7g03999 7 37778872 37782116 ECH