Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03980 ATGGTGTTGAAATTCGTGGGTAACAGTAATACTGATGATATCATGTCTATGTGTAGGTGGTTGAGCACAATTGTAGTTGGAAGTATTGAAGAGTCATGGTTTGATTCGGTTGCAGTATTTGACTCTGACTGTGATGATGATTACCAGAGTGTTCCTGATGATGTTGTATCTCTAAGTGGGATTGAAGGAGGTTCTGTATTGAGTTTTCCATCTTCAAGAAATGCCAATCATGGAGTTTCCACAGATCAAGTTCAGAAACAGGAGTTACAGACAGGCCATTTTGCTAATATCTCTGAGGCTTCCAGAAGTTCAGATGTCCAATATTCTGGTGTAGATGTCATTGATTCTCCACGTGAGCCTGTGTTCCTTGACGAAATTTCCTCAGTGGACGCAAACTCCAACAAGGATGATGGACTTTTGGATAACTGTGGGATTCTTCCAAACAATTGTTTGCCATGTCTTGCGTCTACCATTTCTTCTGTTGAAAAGAGAAGATCATCAAGTTCTAGTCCTCCTAATGCAAGGAAGAAGACTGCTACAAAAGTTTCCTTCAAATGGAAAGAAGGACATGGGAATGCTACTCTATTTTCCTCAAAAACGCTTCTACAAAGACCAATAGCAGGTTCTCAAGTACCCTTTTGTCCAATTGAGAAGAAAATGCTTGATTGTTGGTCACAAATTGATGCAGGCACTTTCAAAGTTCGAGGAGTAAATTATTTCAAGGATAAGAAAAAGGACTTTGCTCCTAACTATTCTGCATATTACCCATTTGGTGTAGATGTTTTCTTGTCCCCACGGAAAGTAGACCACATAGCTCGCTTTGTGGAACTTCCTGTTATGAGTTCCTCTGGGAAATTTCCTCCCATACTAGTTGTAAATGTTCAGGTTCCACTCTATCCTGCCACACTTTTTCAAGGAGAAACTGATGGTGAAGGAATGAGCATTGTTTTGTACTTTAAACTTTCGGAAAGTTACTCCAAGGAACTTCCACTGCCTTTTCAAGAAAGCATCAGAAGATTGATGGACGATGAAGTTGAAAAGGTAAAGGGTTTTCCTGTAGATACAATTGCACCCTTCAGGGAAAGGTTGAAAATTTTAGGCCGTGTTGTCAACTTGGAAGATCTTCATTTGAGTGCAGCAGAGAGGAAGCTTATGCAAGCTTACAATGAGAAACCTGTTCTTTCACGTCCCCAACATGAGTTTTTCACGGGTGAAAATTACTTTGAGATTGATTTGGATATGCATAGATTCAGTTATATATCCAGGAAAGGGTTTGAAGCATTCCTTGACAGATTGAAGATTTGCACGCTAGATGTTGGCCTCACAATTCAGGTTTTATCAGAAGATAACACTGATGATACTCAGTTACGTGTGAATATTATATGGTATAATAAGGAAATTGTTGTGGGGTTTTTTGTGATGAATCACAACAACAACATGCGTGTGATTGAAGATGCCAACTTGAAATAG 1470 0.3939 MVLKFVGNSNTDDIMSMCRWLSTIVVGSIEESWFDSVAVFDSDCDDDYQSVPDDVVSLSGIEGGSVLSFPSSRNANHGVSTDQVQKQELQTGHFANISEASRSSDVQYSGVDVIDSPREPVFLDEISSVDANSNKDDGLLDNCGILPNNCLPCLASTISSVEKRRSSSSSPPNARKKTATKVSFKWKEGHGNATLFSSKTLLQRPIAGSQVPFCPIEKKMLDCWSQIDAGTFKVRGVNYFKDKKKDFAPNYSAYYPFGVDVFLSPRKVDHIARFVELPVMSSSGKFPPILVVNVQVPLYPATLFQGETDGEGMSIVLYFKLSESYSKELPLPFQESIRRLMDDEVEKVKGFPVDTIAPFRERLKILGRVVNLEDLHLSAAERKLMQAYNEKPVLSRPQHEFFTGENYFEIDLDMHRFSYISRKGFEAFLDRLKICTLDVGLTIQVLSEDNTDDTQLRVNIIWYNKEIVVGFFVMNHNNNMRVIEDANLK 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03980 489 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 224 448 IPR009769 -
Vimu7g03980 489 PANTHER CW14 PROTEIN 26 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03980 Vimu-Chr7 37521940 37526104 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03980 - - gmx:100819425 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03980 7 37521940 37526104 Vimu7g03980 7 37521940 37526104 ECH
Vimu7g03980 7 37521940 37526104 Vimu7g03980 7 37521940 37526104 PCT