LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu7g03964	ATGGAAGAAACTGTGAAATTGAACATGTGGGGATACCAGGTCGCAACTTCTTCGCAGGCCTGCGTTTCAGCCATCAACTCTTACTATCATCAGGTTCTCATCTATGGAAGAGAAAGGTCTGTGATTCTGGAAGCAGTGGCACATGACAATCACTGTGTCTTGGCCAACATCTTGGCAGCACATTTCCTTTACTCGCCTGATTATTCTCGTGCTCTCACTTGTCTGCACGCCGCTCAGTCCCACCTTGATCAGGCCACCTTGTACGAGAAACTTGTTTTCGATACCATCAGTTATTTGCTATCCGAAGATAGAGACGACGATGTAGCTCTTGAATTGCATTCCAATCTTCTAAAGGAGTTCCCAAGAGATCTGGTTTCTCTAAAGAGAGCACAAGTTTTATGCTTCTACATGGGTCAACCTGGTCTTTCTTTGTCTCTTATTCAACAGGTTCTACCTCAAAATGAAGGACAAAACTACATATATGGCATGCTTGCGTTCCCTTTACTCGAGCTTGGGCAGATGGCGGAGGCTGAGAAAGCTGCCAGTAGGGGATTTGAGATCAATAAGGAAGACATCTGGTCACAGCATGCTTTATGCCATGTGCTTCAGTACAAGTGTTGTTTTAGAGAAGCTGTTAAGTTCATGGAAGAATGTTCATCATCGTGGTGTTCTGCTTCATCTTTCATGTTGACACACAATTGGTGGCATGCGGCCGTTTGTTACTTAGAGGGTAATGCTCCTACACAAAGTGTGTTAGAGATATATGACAATTATATATGGAAGGAGCTAGACAAAGATGATTCTATGAAGGCAGAGGTTTACTTAAATGCTGCTGGTCTGCTTCTGCGGTTGTATGTACGAGGAGAATTGGATATCTATGGTGATCGTCTCAAGTTGCTTGCTGAATGTCTAACTAACGAAGCAAACTGGCATATAGAGTGGCACTTTGATGTCTTGATACTTTGGACTTTGGCAAAGGCTGGAGAAGTTTCTAAAGCAGAAGATCTTCTAAAGGGCTTAAAAAGCAGGTTTTTGAGGATGACTAAAAAGAAGCAACAAAGAATGAAGAGAGGAATGATGCTTGCAGAAGCACTTTATGCGTACGGAATGGGAGATGAGAAACATGGACTGGATTTACTTGATCCAGATTTTGATGCCACTGATTATAAGGTCATTGGGGCATCTGATGAACAAGTGGACGTGTTCAATGAAGTTTGGTACAACATGTTGCTGAATACTGGAAAAGCGTTGAAGGGTAAAATCTCGAGCTTTTTCTATGAAATTCAAACCCACGAATCTTCTTCTCTAACTATTATGATGAAATCCATCACAGCAATCGAAGTGCTGGAGAAGCAAATCAAGAAAAGAGATGGGGTCCCCTACTTGTGGCGTCTACTAGAGAGGGGATACAAATTAGCTAACAAACCAGAAGAAAAAACTGCGAACGAGAAAGCCACGTCTTTGGAGAATCGTTACTTTAACTGA	1485	0.4236	MEETVKLNMWGYQVATSSQACVSAINSYYHQVLIYGRERSVILEAVAHDNHCVLANILAAHFLYSPDYSRALTCLHAAQSHLDQATLYEKLVFDTISYLLSEDRDDDVALELHSNLLKEFPRDLVSLKRAQVLCFYMGQPGLSLSLIQQVLPQNEGQNYIYGMLAFPLLELGQMAEAEKAASRGFEINKEDIWSQHALCHVLQYKCCFREAVKFMEECSSSWCSASSFMLTHNWWHAAVCYLEGNAPTQSVLEIYDNYIWKELDKDDSMKAEVYLNAAGLLLRLYVRGELDIYGDRLKLLAECLTNEANWHIEWHFDVLILWTLAKAGEVSKAEDLLKGLKSRFLRMTKKKQQRMKRGMMLAEALYAYGMGDEKHGLDLLDPDFDATDYKVIGASDEQVDVFNEVWYNMLLNTGKALKGKISSFFYEIQTHESSSLTIMMKSITAIEVLEKQIKKRDGVPYLWRLLERGYKLANKPEEKTANEKATSLENRYFN	494

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu7g03964	494	Gene3D	Tetratricopeptide repeat domain	44	222	IPR011990	GO:0005515
	Vimu7g03964	494	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	21	-	-
	Vimu7g03964	494	PANTHER	TETRATRICOPEPTIDE REPEAT PROTEIN 38	7	478	IPR033891	-
	Vimu7g03964	494	CDD	StaR_like	48	407	IPR033891	-
	Vimu7g03964	494	SUPERFAMILY	TPR-like	100	222	IPR011990	GO:0005515

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu7g03964	-		-	gmx:100803771	798.89

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vimu7g03964	7	37351804	37356429	Vimu7g03964	7	37351804	37356429	ECH