Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03961 ATGGAGTTATTCACCAAAACCAACGTGGTGAGGTTGCGGAGCCACCTTGACAAGTATCTCGTGGCCGACGCAGATGGCAGCCAGGTCCGCCAGAGCCGCAAGGCCTCTGGCCGGGGAGCGCGGTGGACGGTAGAGGAGATCACGGACGGAGGAAGCAAAAAGGTACGCCTAAGGAGCTATCACGGAAGGTACTTAACGGCGACGGAGGCACCGTTTCTGTTTGGGATGACAGGAAAGAAGGTTCTCCAGAGGGATTTGGAGCCCGGCGCGGACTTCAAGCACGACTGGGAAGTGACACGCGACGGGTTCCAGGTGAAGTTGATGTGCTGGAGTGGGAAGTTCCTGCGCGCGAACGGAGGGACGCCGCCATGGCGGAGCAGCGTGACGGTGGACGAGCCGCACAGTTCCGCGACGAAGGATTGGGTTCTGTGGGACGTGGAGACTGTGGAGGCGGTGGAGGAGTTGGTGGATGATTTGTGCGACAGCACGGTTTCGTCTGTCGCTTCCGATGATTTCTCCGTCGATTCGGAACCGGCGTCGCCGATGTCCGTTTTTGCCCTCAAGTCGCCGCCGGCGAGGCGGAACTCGAACCTGATGCTGCAGGCAATAACTTCCAACAAGTTCAGAAATGGCATGGACTTCTTCCACCGCGCCAAGGCGGTCCGCCTCCGCAGCCACCACGACAAGTATTTGCTTGCGGAGGACGACGAGGAGTCCGTCACCCAAGGCCGCAACGGCTCCTCCAAGAGCGCGCGCTGGCTCGTCGAATACGTCCCCGAATACGACAACATAATTCGCCTGAAAAGCTGTTACGGAAAGTACCTCACAGCCTCCAACATCAACTTCCTCCTGGGCATGACGGGCCACAAGATCCTCCAGACCCTCCCTCAGAGGCTCGACTCCTCCGTCGAGTGGGAGCCCATCAAGGACGGAGGCCGCGTCAGGCTCAAGACTCGCTACGGCAACTTCCTCCGCGCCAATGGGGGCGTGCCGCCCTGGAGAAACTCCGTCACGCACGATATTCCGCACAGGACCGCCACCCAGGACTGGATCCTCTGGGACGTGGATGTCGTCGAGATTTATGTCAACTCTCCGGCGAATAGCAGTAAACCCTCTGCTCCCCCGTTGCCAGGTTCTGACCCTGTTCCAGTCCTGGCCAGCGCGCCGGTTCCCCCACCATCATCATTGTCTGCCAGCTTTACGAGGCAACAGCACTTTTTTCCTTGCAGGCTTAAAAATACTGAAGTTTTCACTTTACATAGCCTTCTTGTCGTTGTTGTGGGGGATAATTGTGGTTTGTTTTGTTTGCAGTCGAATGAATTGAATGGTTTGTCGCAGAAGATGGAAGGGCGGATTATTTACTACAATATTGCTGAAGAGAACGGGGAGGTGTTGGATGAAGGTTCGCAGGGCTATTCTTTGATTTTCAAAGGGAATGGAGTTGAAGAATTGACTCGAAAGTTCGAGGAAGAGACAGGTCTAGAGGGAATCATTGTATGTAATCGGAGTCCTTTGAATGGAAGGCTTTATCCTCTTCGCTTGCAGCTTCCACCAAACACCGTGACCATGCGAGTTGTTTTGGTTCTTCCCATGTCAAATGGTCAGTTTTCTTCTTGTTTCTATCTCTTTCTTCTAGATGTTCACTTCGTATAA 1653 0.5493 MELFTKTNVVRLRSHLDKYLVADADGSQVRQSRKASGRGARWTVEEITDGGSKKVRLRSYHGRYLTATEAPFLFGMTGKKVLQRDLEPGADFKHDWEVTRDGFQVKLMCWSGKFLRANGGTPPWRSSVTVDEPHSSATKDWVLWDVETVEAVEELVDDLCDSTVSSVASDDFSVDSEPASPMSVFALKSPPARRNSNLMLQAITSNKFRNGMDFFHRAKAVRLRSHHDKYLLAEDDEESVTQGRNGSSKSARWLVEYVPEYDNIIRLKSCYGKYLTASNINFLLGMTGHKILQTLPQRLDSSVEWEPIKDGGRVRLKTRYGNFLRANGGVPPWRNSVTHDIPHRTATQDWILWDVDVVEIYVNSPANSSKPSAPPLPGSDPVPVLASAPVPPPSSLSASFTRQQHFFPCRLKNTEVFTLHSLLVVVVGDNCGLFCLQSNELNGLSQKMEGRIIYYNIAEENGEVLDEGSQGYSLIFKGNGVEELTRKFEEETGLEGIIVCNRSPLNGRLYPLRLQLPPNTVTMRVVLVLPMSNGQFSSCFYLFLLDVHFV 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03961 550 SUPERFAMILY Actin-crosslinking proteins 216 358 IPR008999 -
Vimu7g03961 550 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 212 528 - -
Vimu7g03961 550 SUPERFAMILY Actin-crosslinking proteins 7 147 IPR008999 -
Vimu7g03961 550 MobiDBLite consensus disorder prediction 366 388 - -
Vimu7g03961 550 Pfam Domain of unknown function (DUF569) 212 353 IPR007679 -
Vimu7g03961 550 Pfam Domain of unknown function (DUF569) 1 144 IPR007679 -
Vimu7g03961 550 MobiDBLite consensus disorder prediction 370 388 - -
Vimu7g03961 550 Gene3D - 4 148 - -
Vimu7g03961 550 FunFam BnaC05g19630D protein 216 356 - -
Vimu7g03961 550 FunFam BnaC05g19630D protein 5 147 - -
Vimu7g03961 550 Gene3D - 220 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03961 Vimu-Chr7 37309433 37316103 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03961 - - gmx:100811752 793.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03961 7 37309433 37316103 Vimu7g03961 7 37309433 37316103 ECH
Vimu7g03961 7 37309433 37316103 Vimu7g03961 7 37309433 37316103 PCT