Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03913 ATGGCGCAAGAACAGGAGTTCAGAACAAGCGACTCACTTTCAAAATGTGAGACCTATTTCGAAATCATACAATCTAGAAAGAAGCTACCGCTGTCATTGCAGGAAACCTTGACAGATGCATTTGCAAAGATTCCGGTCTCTTCTTTTCCAGAAGTTCCTAGCGGAAAAGTGATTGAAATTCTAGCAGACACGCCCGTAGGAGAAGCAGTTAAGATTCTATCTGAAAGAAACATTTTAGCAGCACCAGTAAAAGACCCAGACGCAGCTGATAGTTCAGATTGGAGAGTCAAGTACCTTGGCATCATTGATTATTCAGCCATCATTCTCTGGGTGCTGGAGAGCGCAGAACTTGCAGCAGCTGCTATATCAGCAGGTTCAGCAACAGCTGCTGGAGTTGGTGCAGGAACCGTGGGTGCTTTGGGAGCAATAGCATTGGGAATGACAAGTCCTGCTGCAATGGCAGGAATAACTGCTGCTGCAGCAGGTGCTGCACTGGCAAGTGGCATTGCTGCAGAAAATATGATGACTAAAGGTGCACCTCAAGCTGCTGATAATCTGGGAGAAGATTTTTACAAAGTTTTACTGGAAGAAGAACCCTTCAAGTCAACGACGGTGAAATCAATAGTTAAATCATATCGATGGGCACCTTTTGTTCCAGTTGCAAGAGATAGCGCTATGTTGACTGTCTTGTTACTTCTCTCAAAGTATAGGCTGAGGAATGTACCTGTCATAGAACCAGATAAACCTGACATGGTGAACTTCATTACTCAGTCTGCAGTTATCCAAGGTCTTGAGAGATGCAAAGGCAGAGATTGGTTTGACTGCATTGCAGAAAAGTGTATATCTGATCTTGGACTTCCATTTATGTCTACAGCTGAGGCAAGGATTGGTGTCTTATATTTTCAGTTTCCCTTGGCTGTTATTAGCATTCAGAGCAATGAGTTGATTCTTGAAGCTTTCAAGCAAATGAGGGATAATAAAATCGGTGGACTTCCTGTAGTAGAGGGGCCAAGAAAGAAAATTGTTGGAAACGTGAGCATACGAGATATCAGATACTTGCTGCTAAGTCCTGAGATCACAAATTTTAGGCAACTGACTGTGATGGATTTCCTGAAAAGAATTGTCTCTTCGTCCCTGCAAACTGGGAACGCTAGCCACCAGCCTATAACATGCAAGCCTGACTCGACACTGCAGAGTGTGATCCATACTCTTTCTTCTCAGTCTATTCACAGGATTCATGTGGTAGATGGACAGGATGAATTAGTTGGAGTCATTACACTGAGAGATGTTATCTCTTGTTTTGTAACCGAACCTCCTTACCATTTTGATGATTACTATGGATTTGCAGTGAAGGAAATTTTTATTCAGTGA 1371 0.4289 MAQEQEFRTSDSLSKCETYFEIIQSRKKLPLSLQETLTDAFAKIPVSSFPEVPSGKVIEILADTPVGEAVKILSERNILAAPVKDPDAADSSDWRVKYLGIIDYSAIILWVLESAELAAAAISAGSATAAGVGAGTVGALGAIALGMTSPAAMAGITAAAAGAALASGIAAENMMTKGAPQAADNLGEDFYKVLLEEEPFKSTTVKSIVKSYRWAPFVPVARDSAMLTVLLLLSKYRLRNVPVIEPDKPDMVNFITQSAVIQGLERCKGRDWFDCIAEKCISDLGLPFMSTAEARIGVLYFQFPLAVISIQSNELILEAFKQMRDNKIGGLPVVEGPRKKIVGNVSIRDIRYLLLSPEITNFRQLTVMDFLKRIVSSSLQTGNASHQPITCKPDSTLQSVIHTLSSQSIHRIHVVDGQDELVGVITLRDVISCFVTEPPYHFDDYYGFAVKEIFIQ 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03913 456 Gene3D - 292 437 IPR046342 -
Vimu7g03913 456 SUPERFAMILY CBS-domain pair 307 443 IPR046342 -
Vimu7g03913 456 CDD CBS_pair_SF 307 431 - -
Vimu7g03913 456 ProSiteProfiles CBS domain profile. 384 444 IPR000644 -
Vimu7g03913 456 SUPERFAMILY CBS-domain pair 38 262 IPR046342 -
Vimu7g03913 456 ProSiteProfiles CBS domain profile. 52 117 IPR000644 -
Vimu7g03913 456 Pfam CBS domain 385 432 IPR000644 -
Vimu7g03913 456 Pfam CBS domain 307 354 IPR000644 -
Vimu7g03913 456 Gene3D - 48 268 IPR046342 -
Vimu7g03913 456 SMART cbs_1 56 112 IPR000644 -
Vimu7g03913 456 SMART cbs_1 306 355 IPR000644 -
Vimu7g03913 456 SMART cbs_1 216 265 IPR000644 -
Vimu7g03913 456 SMART cbs_1 387 435 IPR000644 -
Vimu7g03913 456 ProSiteProfiles CBS domain profile. 302 360 IPR000644 -
Vimu7g03913 456 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 52 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03913 Vimu-Chr7 36656716 36658854 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03913 - - gmx:100800376 684.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03913 7 36656716 36658854 Vimu7g03913 7 36656716 36658854 ECH