Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03883 ATGGGTACTTCTGGCGACAATTTTCTCCAAGTTCTCTTCAAGAACTTCGATGTTCTTGCTCTATATGCTTCGATAAAGGCCATAGAGAGTAGGTCTAGTATTGATGATCAGCAATGGCTGACTTATTGGGTTCTCTATTCTTTGATCACTCTGTTTGAGCTCACATTTTCCAAAGTTCTTGAAGTGCTTGCCATTTGGCCTTATGCCAAGTTGATACTTAGTTGCTGGCTAGTTCTTCCGCAGTTCAGTGGGGCAGCACATGTTTATAGGCATTATGTTAGACCATTCTATATGAATCCACAAATGCCACAAATGCCAAAGTTTTCAGGAGCCTCTCAAATGTGGTATGTTCCTCGAAAGAACATATTTAGTAAGCAGGATGATGTCCTTTCTGCTGCTGAGAGGTACATGGAAGAGCATGGAACTGAAGCATTTGAAAGACTCATAACCAAGGCTGACAGAGAAGCTAGAGGACGGAGGAACGGAAGTTATATGATCTTTGATGATGATTATATATATTAA 522 0.4061 MGTSGDNFLQVLFKNFDVLALYASIKAIESRSSIDDQQWLTYWVLYSLITLFELTFSKVLEVLAIWPYAKLILSCWLVLPQFSGAAHVYRHYVRPFYMNPQMPQMPKFSGASQMWYVPRKNIFSKQDDVLSAAERYMEEHGTEAFERLITKADREARGRRNGSYMIFDDDYIY 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03883 173 PANTHER HVA22-LIKE PROTEINS 20 140 IPR004345 -
Vimu7g03883 173 Pfam TB2/DP1, HVA22 family 21 96 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03883 Vimu-Chr7 36166953 36172768 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03883 K17279 - gmx:100775940 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03883 7 36166953 36172768 Vimu7g03883 7 36166953 36172768 ECH
Vimu7g03883 7 36166953 36172768 Vimu10g01020 10 9412157 9413665 ECH
Vimu7g03883 7 36166953 36172768 Vimu7g03883 7 36166953 36172768 PCT