Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03797 ATGGTTACATTCCCTTTTAGGAGATATGATGGTCAATATGTGGTACATTCTCTTATTGCTGGAAATGGAATGTTGGGACTTGGGTTGATATGTCCCACATTGAGTAGCGTGGGATTCTTGACGGATTCAAGTGACTTGGGAGGGTTACCCCATTGCTTGGGTGTTATCCTGTTAGGACCAAATTTCGAGGGTGATGAACTAGTACAACAACCAAACCAGACTGTGGATGGCCTGTTACATGCACTGGGACTTCAAAAATATGCCATTCTCTTTAAGGCAGAGGAAGTGGATATGACTGCATTGAAGCAGATGGGAGAAAATGATCTCAAAGAGCTCGGGATTCCTATGGGTCCAAGGAAAAAAATTCTTCTCGCTCTCTTGCCCCGTACCAAGCGTCAACAATGA 405 0.442 MVTFPFRRYDGQYVVHSLIAGNGMLGLGLICPTLSSVGFLTDSSDLGGLPHCLGVILLGPNFEGDELVQQPNQTVDGLLHALGLQKYAILFKAEEVDMTALKQMGENDLKELGIPMGPRKKILLALLPRTKRQQ 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03797 134 FunFam Sterile alpha motif domain-containing protein 72 130 - -
Vimu7g03797 134 Gene3D - 72 134 IPR013761 -
Vimu7g03797 134 PANTHER SCP160 70 130 - -
Vimu7g03797 134 SMART SAM_4 67 132 IPR001660 GO:0005515
Vimu7g03797 134 Pfam SAM domain (Sterile alpha motif) 71 126 IPR001660 GO:0005515
Vimu7g03797 134 SUPERFAMILY SAM/Pointed domain 71 126 IPR013761 -
Vimu7g03797 134 ProSiteProfiles SAM domain profile. 70 133 IPR001660 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03797 Vimu-Chr7 33713611 33717444 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03797 69 126 Glycosyltransferase AT3G07170 60.345 4.41e-18 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03797 - - gmx:100796844 134.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03797 7 33713611 33717444 Vimu7g03797 7 33713611 33717444 ECH