Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03711 ATGGCAGATTCAAAACCAGGATTGAGGAAGCCCGTGTTCACCAAGGTTGAACAGCTTCGTCCAGGAACGAGTGGGCACACTTTAACCGTGAAGGTGGTCAATGTTAAGATGGTGATGCAGAAAGGTCGCTCCGATGGTCCTCAATCCCGTCAAATGCGAATTGCTGAATGTTTGGTTGGTGATGAGACTGGAATGATCATATTTACTGCCAGAAATGATCAAGACTTTGTGAACCCCATGTTAAGGGAAGATGCAGACGCAAGATCGCCTTCGTCGTCTGCATTGAAATTTGAAAAATACCTCAATCCTGCTCTTGATTTCATCCTTTGGCTGAGGCCTGAGAAGTGTAGAAGCAAAAGAGAAACTGATACAAGTGGTAGCCAGTTTTTAAAGAATTCATACAACACTACACAGACGTATAGACTATTGAGTGAGAGCAGGATAGAGAGAAAAGAAAGCTGCAGTTATGTAATGACTTCTCAGATTTGA 489 0.4315 MADSKPGLRKPVFTKVEQLRPGTSGHTLTVKVVNVKMVMQKGRSDGPQSRQMRIAECLVGDETGMIIFTARNDQDFVNPMLREDADARSPSSSALKFEKYLNPALDFILWLRPEKCRSKRETDTSGSQFLKNSYNTTQTYRLLSESRIERKESCSYVMTSQI 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03711 162 Gene3D - 23 87 IPR012340 -
Vimu7g03711 162 SUPERFAMILY Nucleic acid-binding proteins 7 76 IPR012340 -
Vimu7g03711 162 PANTHER OS05G0244600 PROTEIN 3 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03711 Vimu-Chr7 32410207 32411013 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03711 - - gmx:100526985 135.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03711 7 32410207 32411013 Vimu7g03711 7 32410207 32411013 ECH