Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03697 ATGGGGCTGACATTCACGAAGCTTTTCAGTCGGCTTTTCGCCAAGAAGGAAATGCGAATTCTGATGGTTGGTCTTGATGCTGCTGGTAAGACCACTATCCTTTACAAGCTCAAGCTCGGAGAGATCGTTACAACAATTCCTACCATTGGTGAGTTTCTGGACTCTGTTTCTCTTTTTTCGTCACTTGGTTGCTATAATCATGTAGATGATGACGGAGATGTTGTTCTACTGTTCAGTGTGTCAGACAGCTGGAATGTTATGATTATGTTGTATGAACGATTTTTGGTTTCAGGGTTCAATGTTGAGACGGTAGAATACAAGAACATTAGCTTCACTGTTTGGGATGTTGGTGGCCAGGACAAGATTCGTCCTTTGTGGAGGCACTACTTCCAGAACACTCAGGGTCTTATTTTTGTTGTAGACAGCAACGATAGGGACAGAGTTGTTGAGGCCAGAGATGAGTTGCATAGGATGTTGAATGAGGATGAACTGAGAGAAGCAGTATTGCTTGTGTTTGCCAACAAACAAGATCTTCCTAATGCAATGAATGCTGCTGAGATTACCGACAAGTTGGGTCTCCACTCTCTCAGACAGCGCCACTGGTACATTCAGAGCACCTGTGCAACCTCTGGAGAGGGCCTTTATGAAGGTCTGGACTGGCTTTCCAACAACATCGCCAATAAGGTAGCTAATATTTTTTTCCTCGTTTATTGTGGAAGAAAAAAGATTTTAAACAATGCGCTTAATGCCTTTGGAAGTCTTGCGGATTGGTATTCTGGATGCAGGGGTGAACATTATCTAGCTTTTGTTTCTTGGTCCTCTTCCGAGACAACTCGAATGTGTTCATGTAATATGGTTTAG 861 0.4309 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGEFLDSVSLFSSLGCYNHVDDDGDVVLLFSVSDSWNVMIMLYERFLVSGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELREAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKVANIFFLVYCGRKKILNNALNAFGSLADWYSGCRGEHYLAFVSWSSSETTRMCSCNMV 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03697 286 PANTHER ADP RIBOSYLATION FACTOR-RELATED 1 224 IPR024156 GO:0005525
Vimu7g03697 286 SMART sar_sub_1 49 225 IPR006689 GO:0003924|GO:0005525
Vimu7g03697 286 ProSiteProfiles small GTPase Arf family profile. 11 225 - -
Vimu7g03697 286 CDD Arf1_5_like 18 224 IPR045872 GO:0003924
Vimu7g03697 286 Pfam ADP-ribosylation factor family 97 225 IPR006689 GO:0003924|GO:0005525
Vimu7g03697 286 Pfam ADP-ribosylation factor family 5 57 IPR006689 GO:0003924|GO:0005525
Vimu7g03697 286 SMART arf_sub_2 1 229 - -
Vimu7g03697 286 Gene3D - 3 65 IPR027417 -
Vimu7g03697 286 FunFam ADP-ribosylation factor 1 67 229 - -
Vimu7g03697 286 NCBIfam small GTP-binding protein domain 99 204 IPR005225 GO:0005525
Vimu7g03697 286 Gene3D - 94 232 IPR027417 -
Vimu7g03697 286 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 227 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03697 Vimu-Chr7 32277523 32279632 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03697 K07937 - mof:131154824 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03697 7 32277523 32279632 Vimu7g03697 7 32277523 32279632 ECH