Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03649 ATGGCGTTGTTGGAGGAGAAGCGAGTGGAGGAAGAGTTATCGTACCCGATTATGGTGGCCGAGCGAGTTCGCTCGGCGGTGGACGAGGCCGACTCATTCAAAGCTGAGTGCTCGGAGGTGTGGAAGCAGGTCGATCGCCTCCTCCAAATGCTCCGAACCCTCGTCCGCTTTGCCACGGCCACCAACACCTCCGCCGCGTCGCCGCCGCTCTACGAGCGTCCCATCCGCCGCGTTGCTGCCGAGACGGCGAAGAATCTCGACCGCGCTCTTGCCCTCGTGCGTAAGTGCAAACGCCGGAGCATCCTCCACCGTGTCGTCTCCATCGTTGGCGCCGCCGATTTCCGTAAAGTCCTGGGCCACCTGGACGCGTCCGTGGGTGATATGAAGTGGCTCCTCAGCATCTTCGACGCCGACGGCGGCATTGTCCTCTCGCTCCCTCCGATAGCCAGCAACGACCCCATTTTATCTTGGGTATGGTCTTTCATCGCTTCCCTTCAAATGGGTCAATTAAATGATAGAATTGAGGCTGCGAATCAACTTACTTCTTTAGCTCAAGATAACGATAGGAATAAGAAGATCATAGTTGAGGAATGTGGGGTGCCTCCTTTGTTGAAGCTTTTCAAGGAAGGCACTTCCCCTCTTGCTCAAATTGCTGCTGCCGGTGCTTTGTGTCATTTGGCTAATGATTTGGATAGGGTTAGAGTGATTGTGGGTGAGCATGGTGTGCCTGCTGTTGTGCAGGTTCTCAGTGACTCCCCCATGAGGGTTCAGACCCTGGCTGCCAATTTGGTTGCCAGGATGGCCAAGCATGACCCTGTGGCTCAGGAGGATTTCGCCCGCGAGAACGTGATTAGACCTCTTGTGACACTCTTGTCGTTTGACACCTTTGTGGATGATCAATGGGATCATTTGGGGAAGCAAAGTATTCATTCCATTGTTCAGATTAATAAGGAGTTGGGAAAGGGTAGCCGAGGAGGTCGCCATTTTGCGAATTCCTACTCGAATTCGTATTTTTTTGCGGAGGGAAGTAGCCGGGGAGGGAATCATAGGAAGGAGAGGGAGAATGAGGATCCTGAGGTGAAGCTTCAGCTGAAGGTTAGTTGTGCTGAGGCGTTGTGGATGCTTGCGCGAGGGAGTGTGACCAACAGTAGGAAGATAACTGAGACCAAAGGGATGCTTTGTTTGGCTAAGATTGTTCAGAATGAGCAAGGAGAGCTTCAGATTAATTGCTTGATGACGATAATGGAGGTAACTGTAGCTGCTGAATCCAATGCTGACCTTCGTCGAGCAGCGTTTAAGACCAATTCTCCTGCTGCTAAGACTGTTGTGGAACAGCTGCTGAGGATAATCAAAGAAGTGGATAACCCTGCATTGCAAATGCCAGCTATGAAGTCCATTGGTGCGTTGGCTAGGACGTTTCCCGCTAGAGAGACTCGGGTAATTGAACCTCTAGTTGCTCAGATGAGTAATAGAAATGCAGAAGTAGCAGATGAGGCAGCACTTGCTCTTACCAAATTTGCTTCTCCGGATAATTTCCTACATGTTGAGCATTCTAAGACGATAATTGAATTCAACGGCATCCCGGCACTGATGAGACTGCTCAGGAGTAATGAAGTTACCCAGATGCACGATGGGCTAACTCTTCTTTGCTACCTTGCACTTCATGCTGGCAACAGTGAGTCCTTGGAGCAAGCAAGGGTGTTGACAGTGCTTGAAGGTGCAGACAGAACAGTTCTTCCTCAGCAACTAAAGGAATTGGTCTCCAGGGCAATAATCCACCTCAATTTGTATCATGCAGGAATGAATTCTCAAAGGATGTCATATTTGCCTTGA 1833 0.5052 MALLEEKRVEEELSYPIMVAERVRSAVDEADSFKAECSEVWKQVDRLLQMLRTLVRFATATNTSAASPPLYERPIRRVAAETAKNLDRALALVRKCKRRSILHRVVSIVGAADFRKVLGHLDASVGDMKWLLSIFDADGGIVLSLPPIASNDPILSWVWSFIASLQMGQLNDRIEAANQLTSLAQDNDRNKKIIVEECGVPPLLKLFKEGTSPLAQIAAAGALCHLANDLDRVRVIVGEHGVPAVVQVLSDSPMRVQTLAANLVARMAKHDPVAQEDFARENVIRPLVTLLSFDTFVDDQWDHLGKQSIHSIVQINKELGKGSRGGRHFANSYSNSYFFAEGSSRGGNHRKERENEDPEVKLQLKVSCAEALWMLARGSVTNSRKITETKGMLCLAKIVQNEQGELQINCLMTIMEVTVAAESNADLRRAAFKTNSPAAKTVVEQLLRIIKEVDNPALQMPAMKSIGALARTFPARETRVIEPLVAQMSNRNAEVADEAALALTKFASPDNFLHVEHSKTIIEFNGIPALMRLLRSNEVTQMHDGLTLLCYLALHAGNSESLEQARVLTVLEGADRTVLPQQLKELVSRAIIHLNLYHAGMNSQRMSYLP 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03649 610 Gene3D - 159 433 IPR011989 -
Vimu7g03649 610 SMART arm_5 229 269 IPR000225 GO:0005515
Vimu7g03649 610 SMART arm_5 468 508 IPR000225 GO:0005515
Vimu7g03649 610 SMART arm_5 186 228 IPR000225 GO:0005515
Vimu7g03649 610 SMART arm_5 514 554 IPR000225 GO:0005515
Vimu7g03649 610 Gene3D - 11 134 IPR036537 GO:0007166
Vimu7g03649 610 Gene3D - 434 577 IPR011989 -
Vimu7g03649 610 PANTHER ARMADILLO REPEAT ONLY 4 8 598 - -
Vimu7g03649 610 SUPERFAMILY ARM repeat 167 571 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03649 Vimu-Chr7 31568867 31571676 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03649 - - gmx:100779659 1048.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03649 7 31568867 31571676 Vimu7g03649 7 31568867 31571676 ECH