Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03523 ATGATCTCTCCCTTTTACATGTTAGAGAAGAAGAAGAAGAAGAAGATGAAACGAAAGATCCCAAACTTGATGACAGAGAAGGAGATAACGGCTTGGCTCAACGAAGATAAAGGCACATCAAAGGGGCCTAGAACTGGGTTTCGATCTGATCCCGTGCTGAATTTGAAGCTGGTCCTCCAATCCTTCAAATTTCGGGCGAAGCTCCGAAAAGGTGTAGTACGGTTTGATTTGGAAATGGACAACTCCAAAAACAGGCATAATGATAGTCTGGGTGTTAACAAGATGGGAAAAAATATAAGGAAGAGCCCTTTACATCAGCCCAATTTTGCTAACAACGCTGCTAGACAACAGCCTCAGCCTCAGGTTTACAACATTAGCAAGAATGAATTTCGGGATATTGTTCAGCAGCTTACTGGATCACCCTCCCAGGATCATCCACCTAGACCTCCACACAATCCACCGAAGCCGCAGAGCATGCGACTGCAGAAAATTAGACCTCCTCCGTTAACGCCAATCAATCGGCCTCGCATGCCCCCGCCAATGCCGGTGCCTGCTGCCGCTCCTCATCCAGTTCCTCACAATAATGCCATGCCAAGACCTGCTCAGTTTGGACAACCGTTGCCTAGTCCTGGGGATATATGGTCTAATACGACCGAGTCACCCATATCTGCTTACATGCGTTACCTTCAGAATTCAATAATGGATCCAAGTTCAAGGGGTAACCAAGTTCAGCCTCAACCACATCCGTACCCTCAACCTCAAATACCCGGCAATGTCCAGCCTCATCCCCCTCCCTCGTCTGCTATGTTTCCTAATCCTCCCATGCCCATGTTCCCTTCCCCGAGATTTAATGGTCCTATTCCACCAATGAATGCTACTAACTCTCCCGTGCCTACTCTTCTTCCTTCAGCACAAGCAAATGGTCCTCCTCCCCCTTTACTTTCTCCAACCTCTCAATTCCTCCTGCCTTCTCCAACTGGTTACATGAATTTGTTATCTCCTCACTCACCCTATCCACTTTTGTCACCTGGCATTCAGTTCCCGTCTCCGCTTACACCAAATTTTCCGTTCTCGTCCACGGGGCAGTCAGGGATTTTAGGTCCTGGCCCACAACCTCCTCCTTCTCCTGGCCTTGTGTTTCCGTTATCACCTTCAGGCTTTTTTCCCATATCAAGTCCCAGAGGTTCTAGGCTTGTACTTTGGCATGTGATGTACAATCAGGTTTCCTTTTACTTTGACAAGTTTTACACTAGGCAATACATATTGAAGATCAGACAACTCAATTGGGCAGTTGGACAGGAGCTGATTGGTTTGTTTACTGTTGCCTTTTCACCATCATGCATTCCTTCTAGGTCTGACTTTGACTATTTGTTCTGCATCTTCCGTTTCCAGTTTCCTTATATCATTGACAGGGCGTGGGGCCAGTTCGTTCATGAAATTTATGTTGAATAA 1452 0.4669 MISPFYMLEKKKKKKMKRKIPNLMTEKEITAWLNEDKGTSKGPRTGFRSDPVLNLKLVLQSFKFRAKLRKGVVRFDLEMDNSKNRHNDSLGVNKMGKNIRKSPLHQPNFANNAARQQPQPQVYNISKNEFRDIVQQLTGSPSQDHPPRPPHNPPKPQSMRLQKIRPPPLTPINRPRMPPPMPVPAAAPHPVPHNNAMPRPAQFGQPLPSPGDIWSNTTESPISAYMRYLQNSIMDPSSRGNQVQPQPHPYPQPQIPGNVQPHPPPSSAMFPNPPMPMFPSPRFNGPIPPMNATNSPVPTLLPSAQANGPPPPLLSPTSQFLLPSPTGYMNLLSPHSPYPLLSPGIQFPSPLTPNFPFSSTGQSGILGPGPQPPPSPGLVFPLSPSGFFPISSPRGSRLVLWHVMYNQVSFYFDKFYTRQYILKIRQLNWAVGQELIGLFTVAFSPSCIPSRSDFDYLFCIFRFQFPYIIDRAWGQFVHEIYVE 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03523 483 MobiDBLite consensus disorder prediction 137 213 - -
Vimu7g03523 483 MobiDBLite consensus disorder prediction 83 118 - -
Vimu7g03523 483 MobiDBLite consensus disorder prediction 234 254 - -
Vimu7g03523 483 MobiDBLite consensus disorder prediction 168 195 - -
Vimu7g03523 483 Pfam VQ motif 118 143 IPR008889 -
Vimu7g03523 483 MobiDBLite consensus disorder prediction 104 118 - -
Vimu7g03523 483 PANTHER PROTEIN HAIKU1 79 394 IPR039612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03523 Vimu-Chr7 29951600 29960016 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03523 - - gmx:100776990 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03523 7 29951600 29960016 Vimu7g03523 7 29951600 29960016 ECH