Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03509 ATGGCAGCGAGCAACAATGTGATTGTATGCATAAACCTCGTGGCCGTGATCCTCTCACTCCCAATCATCGGTGCCGGAATCTGGCTATCAAACGGGCAAGCAGATTCTTGCGTCCAGTTTCTGCAATGGCCCGTCATCATCCTCGGAGTTCTCATCTTGGTGGTGGCTCTCGCAGGTTGCATTGGAGCCTTTTTCAGAATCACGTGGCTCCTCATAGTGTACCTCGTTGTCATGCTCGTGCTGGTGATACTGTTAGTGTGTCTGGTGGGCTTTGTTTACATGGTCACGCTTCGAGGTCATGGCAACATTGAAGCTGACCGCGCTTACTTGCAATATCATATGAACGATTTTTCTGGGTTCCTTCGTCGAAGGGTTAGAAGCTCCTTCAAGTGGGATCGCATCAGAAGCTGCATTAGCCAAACCAACGTGTGTGCTCAGCTCAGCCAGAGTTACAGAATGGCCGAGGACTTCTTCAACGCACATCTAACGCCCATGCAGTCAGGGTGCTGCAGGCCACCAACGCAATGTGGGTATACTTTTGTGAACCCAACCTATTGGATTAGAGCGTTCAACCTTGCAGCAGATATGGATTGCCTGCAATGGAGCAACGATCAAACACAACTTTGCTACAACTGTGACTCGTGCAAGGGTGGTTTATTGGCTAATCTTAGGAAGGAGTGGAAAAGGGCCAATGTGATATTAATCATCACAGTCATTGTTCTAATTGTGGTGTATTTGGTAGGGTGCTGTGCCTTTAGGAATGCCAAAACTGAAGACCTCTTCCGCAAATACAAACAGGGGTATACTTGA 810 0.4827 MAASNNVIVCINLVAVILSLPIIGAGIWLSNGQADSCVQFLQWPVIILGVLILVVALAGCIGAFFRITWLLIVYLVVMLVLVILLVCLVGFVYMVTLRGHGNIEADRAYLQYHMNDFSGFLRRRVRSSFKWDRIRSCISQTNVCAQLSQSYRMAEDFFNAHLTPMQSGCCRPPTQCGYTFVNPTYWIRAFNLAADMDCLQWSNDQTQLCYNCDSCKGGLLANLRKEWKRANVILIITVIVLIVVYLVGCCAFRNAKTEDLFRKYKQGYT 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03509 269 PRINTS Transmembrane four family signature 6 29 - -
Vimu7g03509 269 PRINTS Transmembrane four family signature 38 64 - -
Vimu7g03509 269 PRINTS Transmembrane four family signature 65 93 - -
Vimu7g03509 269 PANTHER TETRASPANIN-8-RELATED 1 258 IPR044991 GO:0009734|GO:0016020
Vimu7g03509 269 ProSitePatterns Transmembrane 4 family signature. 49 71 IPR018503 GO:0016020
Vimu7g03509 269 Pfam Tetraspanin family 6 251 IPR018499 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03509 Vimu-Chr7 29753879 29754859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03509 1 269 Miscellaneous Gene Families AT5G46700 66.171 2.41e-131 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03509 - - gmx:100795775 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03509 7 29753879 29754859 Vimu7g03509 7 29753879 29754859 ECH
Vimu7g03509 7 29753879 29754859 Vimu7g03509 7 29753879 29754859 PCT