Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03499 ATGGCAGAGGAAAAACTATTCCGGGTAGGGTACGCTTTGTTGCTCAAGAAGCAAAGCAGCTTCATCCGAGATTCGCTCGTGAATCTTGCAAGATCCCGCGGGATAGAACTGGTCCGGATCGACCCGAACCAGAGCCTAAAGGATCAAGGTCCGTTTGATTGCGTCCTCCACAAGCTCTACGGCGACGATTGGAGGAACCAACTGAACGACTTTACCGCGAATTATCCGAATGCCGTCGTTCTCGATTCTCCTGAATCGATTGAGAGGCTCCACAATCGGATTTCGATGCTACAGGTCGTGTCGGAGTTGAAAATCGACGACCGGACCGAGACGGTCGGGATTCCGAAGCAGATTGTGATAAACGACAAGGCGAAGCTGTTCGACAGGCGGATCTGGAAGGCGTTGAAGTCTCCGGTAATCGCAAAACCTCTCGTGGCCGACGGCAGCGCGAAGTCGCACAAAATGGCGCTGGTTTACAACCACGAAGGTTTGAATTCTCTGAAGCCTCCTGTGGTGGTGCAGGAGTTCGTGAACCACGGTGGCGTGATCTTCAAGGTGTACGTGGTCGGGGAGCGCGTGAGGTGCGTGAAGCGGAAGTCGCTGCCGGACGTGGAAGAGGAGGAGTTGTTTTCAAATTTGGCAAGCGATGAAAGAATCGACGACAAATATTACAAGACGATGCATTTGGATGATGCTGAGATGCCTCCTCTGAGCTTCGTTACTCAGATAGCTCGAGAGCTGAGGCGTGTGATGAAGCTAAACCTGTTTAATTTCGATGTTATTAGGGATTCTCGACGCAAAAATCGTTATCTTATTGTTGATATTAATTACTTCCCAGGGTATGCGAAAATGCCTGGTTATGAGACTGTTTTTACTGAGTTTTTGTGTGATGTGTTGTGCAAGAAACAGCAAAGTGAGACTGAGGAGTGTGACAAAGATGCAACGAGGATTGTGATCAATACTTGTAGCGGGGATGGGGAAGACAAAGAGGGTTCTGTATATCTATGA 1008 0.4921 MAEEKLFRVGYALLLKKQSSFIRDSLVNLARSRGIELVRIDPNQSLKDQGPFDCVLHKLYGDDWRNQLNDFTANYPNAVVLDSPESIERLHNRISMLQVVSELKIDDRTETVGIPKQIVINDKAKLFDRRIWKALKSPVIAKPLVADGSAKSHKMALVYNHEGLNSLKPPVVVQEFVNHGGVIFKVYVVGERVRCVKRKSLPDVEEEELFSNLASDERIDDKYYKTMHLDDAEMPPLSFVTQIARELRRVMKLNLFNFDVIRDSRRKNRYLIVDINYFPGYAKMPGYETVFTEFLCDVLCKKQQSETEECDKDATRIVINTCSGDGEDKEGSVYL 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03499 335 PIRSF ITPK 1 310 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Vimu7g03499 335 FunFam Inositol-tetrakisphosphate 1-kinase 83 280 - -
Vimu7g03499 335 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 8 87 IPR041429 -
Vimu7g03499 335 Gene3D - 84 280 - -
Vimu7g03499 335 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 3 304 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Vimu7g03499 335 ProSiteProfiles ATP-grasp fold profile. 104 304 IPR011761 GO:0005524|GO:0046872
Vimu7g03499 335 FunFam Inositol-tetrakisphosphate 1-kinase 117 216 - -
Vimu7g03499 335 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 108 296 IPR040464 -
Vimu7g03499 335 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 82 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03499 Vimu-Chr7 29647813 29648856 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03499 K00913 - gmx:100794373 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03499 7 29647813 29648856 Vimu7g03499 7 29647813 29648856 ECH
Vimu7g03499 7 29647813 29648856 Vimu7g03499 7 29647813 29648856 PCT