Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03477 ATGGAAGTGAAAACTGCAAAGGCATTGGATAGGATTGCTCTCAAATTGAAGAGAAAGCGACCTACCCAATATGCTGCACATGAATGTGGAGCTTTGCAGCCTTCAGGCAGGGTGGTAAAACAGATAAAATTGGGTGAATATAGAAAAAAACATGCAAATGCTGGTCCTCATATTGGGAAGTCCTTGAGTAACCGATTTTTAAGTTATAAAAAAAGTGGGAAACCAGCTCGTCTGATGTTCTATAAGAATGGTGAGTGGGTGGACTTTCCAAGTGATATTCTTGACTTGGTTAAGAAAGATCTTGAAATCAAGAAGTCGGTTGTGGAGGTGGAGTTAAATGGGTATCATATGGTTTTAAATTTTTTCCATATGTATAAGTTGAACATGAAAACTGGTCTGCAACAACCAATGGCTTGGATTGATGAGGCAGGAGGCTGCTTTTTCCCTGAGGTCTATGCTGCTTATGATGAAGAGCTTTATAATCTCTGGAAACAGGGCACTGGAAAAAGTAAAGAGCCATATGGTTCTAATGAAATAAAATTACAATTAGAAATTGAAATAAATGGACTGGATCAGTGGAAGTTGAGGGAGTCTTCTGACGAGTCCGATGCATTATTTAACGGTATTAGAATTGATACTAAACAAAAGAGCTGTCCATATGATGTAGAAGTAGAAAATAGCATTAACAAAGAGGACTGTGAAAATGTTGACGAATCTATACAGCAAAATGAAGAAATAGATTTAAATGCCTATACTGGATCTGTAAATGGAAGGTTGAATTTCGATTCTGTACAGAAGATATTTCTTAAGGGAATGAATAATAATGGCATTACTGATTCTGACATTGTTGGAATTGACCGGTGCTCAGGTGCGTCAATGCAAGCACGATTGGAGCTATTCTTGAAGCAAGCTGAAATTACACAAAAATGTCATGGGGATGCTAATATTCAGTATGCTTGGCTTGCTTCTACTAAACGAGAACTGTATACAATGATGGAGTATGGGCTTGGCCACTGTAGACTATCTGCATTTAAAGGTTCATACGGCACTGGTGTTCATCTTGCACCCGTTACCTGCCCTGACACCAGTGCACGTTATTGTGATGTTGACGAAAATGGGGTTCGACATTTGGTCCTTTGTCGTGTAATAATGGGGAACATGGAGATTCTCCGTCCTGGCACTGGTCAGTTCCAACCCAGTAGCTGTGAATATGATAATGGGGTGGATGACATTCAATGTCCGAGATATTATGTGGTGTGGAATATGAACATGAACACCCACATCTATCCAGAATTTGTTGTTAGCTTCAAGCTGTCTTTTGATGCCGAAGGTCTTTTTGGTGGAAGTGAAAGGAAGAATAATGTTTCTGGGGTTATGACAGCCTGCCATGGTCCTCAAGGACTGTTAAATTCTTGTGCAGTAGTTAAGGGCGCAGCTCCCCCAAGAGTTCCAACATCGCCTTGGATGTCTTTTCCTTTGCTTTTTGCTGCTATCGGAAACAAGGTTCCTCCTAATGATATGGAACGTGTCAGAGAACATTATGAACAGTTCAGGGTATGTAAAGTAGCTCGACTTGTTGTTGCCCTCGCCTTGATTGATGAAATATCTCTAATATATCGTGCCGTTCTTGTTCAGTCAAAGCAGATATCCCGGGCTGATTTTGTGAAGATACTAAGGTTAATAGTTGGAGATGCTCCATTGAAACTTGCAATGACACAACATCAATTTAAGATACCATCCAATGTTAAGGAAGGATAA 1758 0.4005 MEVKTAKALDRIALKLKRKRPTQYAAHECGALQPSGRVVKQIKLGEYRKKHANAGPHIGKSLSNRFLSYKKSGKPARLMFYKNGEWVDFPSDILDLVKKDLEIKKSVVEVELNGYHMVLNFFHMYKLNMKTGLQQPMAWIDEAGGCFFPEVYAAYDEELYNLWKQGTGKSKEPYGSNEIKLQLEIEINGLDQWKLRESSDESDALFNGIRIDTKQKSCPYDVEVENSINKEDCENVDESIQQNEEIDLNAYTGSVNGRLNFDSVQKIFLKGMNNNGITDSDIVGIDRCSGASMQARLELFLKQAEITQKCHGDANIQYAWLASTKRELYTMMEYGLGHCRLSAFKGSYGTGVHLAPVTCPDTSARYCDVDENGVRHLVLCRVIMGNMEILRPGTGQFQPSSCEYDNGVDDIQCPRYYVVWNMNMNTHIYPEFVVSFKLSFDAEGLFGGSERKNNVSGVMTACHGPQGLLNSCAVVKGAAPPRVPTSPWMSFPLLFAAIGNKVPPNDMERVREHYEQFRVCKVARLVVALALIDEISLIYRAVLVQSKQISRADFVKILRLIVGDAPLKLAMTQHQFKIPSNVKEG 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03477 585 SUPERFAMILY ADP-ribosylation 261 438 - -
Vimu7g03477 585 ProSiteProfiles PARP catalytic domain profile. 234 457 IPR012317 GO:0003950
Vimu7g03477 585 Pfam RCD1-SRO-TAF4 (RST) plant domain 484 524 IPR022003 -
Vimu7g03477 585 Pfam RCD1-SRO-TAF4 (RST) plant domain 545 575 IPR022003 -
Vimu7g03477 585 ProSiteProfiles RST domain profile. 482 580 IPR022003 -
Vimu7g03477 585 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 54 573 IPR044964 -
Vimu7g03477 585 Gene3D - 256 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03477 Vimu-Chr7 29432833 29436659 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03477 - - gmx:100800707 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03477 7 29432833 29436659 Vimu7g03477 7 29432833 29436659 ECH