Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03455 ATGGTAGTTTTTTACGTTGATGAAGTTCCAATTAGAGAGGTGTTACGAAGTGAGAAAATGGGAGGTGATTACCCATCGAAGCCAATGTCACTGTATGCGACCATATGGGATGCATCAAATTGGGCAACATCTGGAGGTAAATACAAAGTAAACTATAAGTATGCACCTTTTGTGACCCAATTTAAGGACCTAGTCCTTAAGGGTTGCTCCGTCGACCCCATCCAAGAGATCTTAGACCGCCAAGATTGCTACGAACAACACGAGGATCTCGAGGCTCAAGACTACGCCGCCGTCACTCCCATGCGCCGCCTCGCCATGCGGCGGTTCCGCCAACGTTACATGTACTATTCGTATTGCTATGATACATTAAGGTACAACGTGCCACCACCCGAGTGTGTCATTGTACCCTCGGAGAAACAAAGGTTTAAGGAGACCGGGAGGTTGAGATTCGGCGGCAGCCACCGCCGGCAGTCTCGGCGGAAGAGCCGTACAACAAATACGGTGGCTGATACCGATGAGGGTGATATGTGA 531 0.4953 MVVFYVDEVPIREVLRSEKMGGDYPSKPMSLYATIWDASNWATSGGKYKVNYKYAPFVTQFKDLVLKGCSVDPIQEILDRQDCYEQHEDLEAQDYAAVTPMRRLAMRRFRQRYMYYSYCYDTLRYNVPPPECVIVPSEKQRFKETGRLRFGGSHRRQSRRKSRTTNTVADTDEGDM 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03455 176 Pfam Glycosyl hydrolases family 16 2 53 IPR000757 GO:0004553|GO:0005975
Vimu7g03455 176 SUPERFAMILY Concanavalin A-like lectins/glucanases 2 134 IPR013320 -
Vimu7g03455 176 MobiDBLite consensus disorder prediction 145 176 - -
Vimu7g03455 176 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 2 132 IPR044791 GO:0004553
Vimu7g03455 176 Gene3D - 1 132 - -
Vimu7g03455 176 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 95 132 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03455 Vimu-Chr7 29184241 29185506 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03455 2 153 Glycoside Hydrolase AT1G32170 68.421 2.20e-77 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03455 K08235 - gmx:100786236 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03455 7 29184241 29185506 Vimu7g03455 7 29184241 29185506 ECH