Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03423 CGTTTCATTCGACACGATTTGCTTCTGTATCGGTGGTCTTCTTCCTCCGTCGTGATCTTGTTAGGGTTTGCAGAATCGAAGTTTCCCTACATTTCTTCACTTCGCATCCACGTCGAGATTCCTTCGCAGTTTTTTCCGCATAACCCGAGAAATCAACAGTTACACGTGCACTGTACGATATTATGTTACGTGTCTATGCAGAAATTGGGAGATTTCAAACTGCCACATTTCTTCAATTACCCACCCTATTTCACTTTGCAGCCAGTAAGAGACACAAGAGAGAAGCAGATACAACTATGGAAAGAGCTTATTTTGGATTATTGTAAAACACAGAAGACATTTGTAATTGCCCTTGAAGAAGAATTTCCTCTATTTACAAACCATGTAATTGAAAGGTCTCTTACCCATGAAGCCAGAGAAGCTTTCCTTTCGGCTTTAGTTTCTGAAGGCCGTGCGGAATGGATGGATAAAGGACACAGGAAATGTCTTATTCTCTGGCATCGGATTCAAGATTGGGCTGACATTTTAATTCAATTTGCAAAAGACAATGGGCTGGAAGATGGTGTTGTAACGATTGAAGAAATACGATCAGGGACCGAGTCTCAGGGAACAGAGCTTCACGGAATAGATCGAACTATTTTGAATCGTGCACTGAAACTATTGGAACAGAAAGGAAAGCTTGTGGTCTTTAAAGGAACTTCAGCTGACGATGAAGGAGTTAAATTTTCTATATAA 735 0.4068 RFIRHDLLLYRWSSSSVVILLGFAESKFPYISSLRIHVEIPSQFFPHNPRNQQLHVHCTILCYVSMQKLGDFKLPHFFNYPPYFTLQPVRDTREKQIQLWKELILDYCKTQKTFVIALEEEFPLFTNHVIERSLTHEAREAFLSALVSEGRAEWMDKGHRKCLILWHRIQDWADILIQFAKDNGLEDGVVTIEEIRSGTESQGTELHGIDRTILNRALKLLEQKGKLVVFKGTSADDEGVKFSI 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03423 244 SUPERFAMILY "Winged helix" DNA-binding domain 167 242 IPR036390 -
Vimu7g03423 244 Gene3D - 166 243 IPR036388 -
Vimu7g03423 244 FunFam vacuolar protein-sorting-associated protein 25 165 243 - -
Vimu7g03423 244 SUPERFAMILY "Winged helix" DNA-binding domain 72 172 IPR036390 -
Vimu7g03423 244 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS25 65 243 IPR008570 GO:0000814|GO:0071985
Vimu7g03423 244 FunFam Vacuolar protein sorting-associated protein 25 70 165 - -
Vimu7g03423 244 Gene3D - 69 165 IPR014041 -
Vimu7g03423 244 Pfam ESCRT-II complex subunit 78 210 IPR008570 GO:0000814|GO:0071985
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03423 K12189 - gmx:100803388 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03423 7 28881257 28885389 Vimu7g03423 7 28881257 28885389 ECH