Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03422 ATGGATCAAAATAGAGAAGAGAGTTGGAGGGAATTAATGAAGAAGATGCTTCCTCCTGGTACTTCCATACCTGATGATGCTTCTAATCTTGATTACTCCATAGCTATGGAATATGTTGGTCCACCAGTTTCATACGAATTGCCAAAAGTTGAGCCTCTTGATGGAAACTCAAGAGCAATTCCCACTGCTGAGCCACTCTCTGGATCACAAAGATCAAATACTCATGTGGGGTCTATGGTGATTGAGCCAATCCCTCTGCCAGTGTCTCGTATTGCCGGTGTAACAAGTTCTCCTAATCAAAGTCCGAGGGTGTCAGGAAGCTCAGATTCTGTGGTTTCTGTCTTACAAAACCCAGATCTTTCTTCCGCTTCACCATCGGCTTCACCTGCTTCAGTTCATAATCCTCCACAGCCGGTGGTTAATGAAGTGAAGAGAGCACCGGTTGTCACTTTTAATACTGTTGATAGATCTCAGAGGAAAGAAGTGGAGGTTGTGAAGCCAGTTTATTCTGAATATGTTGGAGTTTTGAAGGAAAGAAAGAAAAAGAAAATAAGAGTTTGTTATAGGTGTGGAAAAGGGAAGTGGGAAACTAAGGAGTCTTGCATAGTGTGTAATGCCAAGTACTGCAGCAACTGTGTGCTAAGGGCAATGGGATCAATGCCTGAAGGACGCAAATGTGTAACATGCATTGGTCAACCAATTGATGAATCAAAGCGTCTAAAACTAGGTAAATATTCAAGGGTGTTGTCCAGATTGTTAAGTCCTCTAGAAGTCAAGCAAATTATGAAAGCAGAGAAAGAATGTTCTGCTAATCAGCTTCGGCCGGAGCAGCTTATCGTCAACGGGTTGCCCCTCAAGCCGGATGAGATGGCCGAACTACTTGGATGCCTGCTACCTCCACGTAAACTGAAACCTGGTAGATATTGGTATGACAAAGAATCTGGTCTCTGGGGAAAGGAAGGGGAAAAACCTGACAGAATCATAAGTTCAAACCTGAATTTCACTGGGAAACTTAGCCTCAATGCTAGTAACGGAAACACCGAGGTTTACATGAATGGTCGAGAGATCACAAAACTTGAACTTAGGGTACTCAAACTGGCAAATGTGCAGTGTCCTCGTGATACACACTTTTGGGTTTATGATGATGGTCGTTATGAGGAGGAAGGTCAAAATAATATCAGAGGAAACATTTGGGAGAAGGCCTCAACAAGATTCATATGTGCCTTATTCTCTCTACCCTTTCCCCATGGTCAGCCTCATGGGCTAAAGGATGAAACTAGTCACTATACCACAGTTCCGATTTATCTGGAACAGAAAAAAACTCAAAAGCTTCTTCTTCTTGGAATACAAGGATCTGGTACTAGCACTATTTTTAAGCAGGCGAAGTTTTTGTATGGAAACAAGTTTTCTGCTGAAGAGCTGCAGGATGTTAAACTGATGATCCAGAGTAACATGTATAAATATCTTAGTATTTTACTTGACGGGAGAGAGCGATTTGAAGAGGAAGCTGTTTCTAGAATGAATGGACAAGCTTCTCCTGCTCAAGCTACGGAAACAAGTAATATTTCATTCCATGTTAAGCTCTCTGCATTTCTTAGGGTCCCTGACCCTGATCATGGATGGTGGAACATATGTAGCAATGGTGAAAGTAGTACTAGTGAATGCATCTATTCCCTCAACCCAAGGCTAAAACATTTCTCTGACTGGCTCCTGGACATTATAGCCACAGGGGATTTAGATGCCTTCTTCCCTGCCGCCACACGTGAATATGCACCATTAGTTGAAGAAGTATGGAAGGATCCTGCCATACAAGAAACCTTCAAAAGAAAAGATGAGCTTCACTTTCTTCCTGATGTTGCTGAGTACTTCTTAAGCCGGGCTGTGGAGATATCTAGTAATGAATACGAACCTTCTGAAAGGGACATAGTATATGCAGAAGGAGTCACTCAGGGAAATGGTTTGGCTTTCATGGAGTTTTCACTTGATGACCGTGTTGCAAAGTCGGATACTTACTCAGATAATCTCGATGCTCAGCTGCCACCACTGACTAAGTATCAACTCATAAGAGTGAATGCCAAGGGCCTCAATGAGGGCTGCAAGTGGGTTGAAATGTTTGAAGATGTTCGAGCTGTGGTGTTTTGCGTTTCCCTAAGTGACTACGATCAGTTGTGGCTTTCCCCAGACAGTAATGGCAGTGGAACACTTGTTCAAAACAAGATGGTACAAAGCAAGGAGCTTTTTGAGACGATGGTGAGACACCCTTGCTTCAAAGACACCCCTTTGGTTCTGGTCCTTAACAAGTATGATATCTTTGAGGAAAAGATCAGCAGGGTGTCCCTGAATACATGTGAATGGTTCAGTGATTTTTGTCCCGTGCGTGCATACCATAATAACCAGTCACTGGCCCATCAGGCCTACTTCTATGTTGCTATGAAATTCAAGGACCTTTATGCATCCCTCACAGGGAAAAAACTCTTTGTGGCACAAGCCAGGGCAAGGGAACGAGTCACTGTTGATGAGGCATTCAAGTACATAAAGGAGGTCCTCAAATGGGATGAAGAGAAGGAGGAAAATTTCTATGGTCCACCTGAGGATTCATTTTACAGCACAACAGACATAAGCTCCTCTCCCTTTGTCAGACAAGAGTGA 2649 0.4315 MDQNREESWRELMKKMLPPGTSIPDDASNLDYSIAMEYVGPPVSYELPKVEPLDGNSRAIPTAEPLSGSQRSNTHVGSMVIEPIPLPVSRIAGVTSSPNQSPRVSGSSDSVVSVLQNPDLSSASPSASPASVHNPPQPVVNEVKRAPVVTFNTVDRSQRKEVEVVKPVYSEYVGVLKERKKKKIRVCYRCGKGKWETKESCIVCNAKYCSNCVLRAMGSMPEGRKCVTCIGQPIDESKRLKLGKYSRVLSRLLSPLEVKQIMKAEKECSANQLRPEQLIVNGLPLKPDEMAELLGCLLPPRKLKPGRYWYDKESGLWGKEGEKPDRIISSNLNFTGKLSLNASNGNTEVYMNGREITKLELRVLKLANVQCPRDTHFWVYDDGRYEEEGQNNIRGNIWEKASTRFICALFSLPFPHGQPHGLKDETSHYTTVPIYLEQKKTQKLLLLGIQGSGTSTIFKQAKFLYGNKFSAEELQDVKLMIQSNMYKYLSILLDGRERFEEEAVSRMNGQASPAQATETSNISFHVKLSAFLRVPDPDHGWWNICSNGESSTSECIYSLNPRLKHFSDWLLDIIATGDLDAFFPAATREYAPLVEEVWKDPAIQETFKRKDELHFLPDVAEYFLSRAVEISSNEYEPSERDIVYAEGVTQGNGLAFMEFSLDDRVAKSDTYSDNLDAQLPPLTKYQLIRVNAKGLNEGCKWVEMFEDVRAVVFCVSLSDYDQLWLSPDSNGSGTLVQNKMVQSKELFETMVRHPCFKDTPLVLVLNKYDIFEEKISRVSLNTCEWFSDFCPVRAYHNNQSLAHQAYFYVAMKFKDLYASLTGKKLFVAQARARERVTVDEAFKYIKEVLKWDEEKEENFYGPPEDSFYSTTDISSSPFVRQE 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03422 882 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 217 853 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vimu7g03422 882 MobiDBLite consensus disorder prediction 92 135 - -
Vimu7g03422 882 PRINTS Alpha G protein (transducin) signature 708 736 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vimu7g03422 882 PRINTS Alpha G protein (transducin) signature 761 770 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vimu7g03422 882 PRINTS Alpha G protein (transducin) signature 635 657 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vimu7g03422 882 PRINTS Alpha G protein (transducin) signature 443 458 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vimu7g03422 882 MobiDBLite consensus disorder prediction 864 882 - -
Vimu7g03422 882 MobiDBLite consensus disorder prediction 858 882 - -
Vimu7g03422 882 SMART galpha_1 423 838 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vimu7g03422 882 FunFam Extra-large guanine nucleotide-binding protein 3 660 858 - -
Vimu7g03422 882 Gene3D - 471 646 IPR011025 GO:0007165
Vimu7g03422 882 Pfam G-protein alpha subunit 438 848 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vimu7g03422 882 SUPERFAMILY FYVE/PHD zinc finger 161 230 IPR011011 -
Vimu7g03422 882 Gene3D - 661 859 IPR027417 -
Vimu7g03422 882 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 438 855 IPR027417 -
Vimu7g03422 882 CDD G-alpha 442 852 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vimu7g03422 882 SUPERFAMILY Transducin (alpha subunit), insertion domain 469 645 IPR011025 GO:0007165
Vimu7g03422 882 MobiDBLite consensus disorder prediction 92 138 - -
Vimu7g03422 882 ProSiteProfiles G-alpha domain profile. 440 860 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03422 Vimu-Chr7 28854100 28859504 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03422 - - gmx:100794534 1601.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03422 7 28854100 28859504 Vimu7g03422 7 28854100 28859504 ECH