Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03411 ATGAAGTGTTGGGTTGGGTTTGCTGAAGGTAAACGAAGAATTGTAGCTTCATCTGCTGTATTAAGCGTATTTTTTGTGAACCGTGAAGTCCCTCGGTTGTTGACTATTCAAATTCCAGTTATATGTCGTGGACTTAATCGTGCACGTAGTCCACCAGTAGCATCTGAACCACTGGGTTATGGTCAAAGACATGATGCTACAGTTGATATTCCTTTGGATACTACAAATGACTCGAAGAAAAAAGGTCAGGAGCTAGCAGCCTGGGAAGCAGATTTAAAACAGAGAGAGAAGAATTGGCCTCCATTGTTCCCAATCATTCACCATGATATTGCAAATGAGATACCGGTTCATGCTCAGAGGCTGCAATATTTGGCCTTTGCAAGTTGGTTAGGAATTGTTCTCTGCCTAGTTTTTAATGTAGTTGCTGTAATTGTCTGTTGGATCAGAGGCGGTGGTGTTAAAATTTTTTTCCTTGCGGTGATATATGCTCTAATGGGTGTTCCCCTTTCATATGTTCTTTGGTACAGGCCTCTCTATCGTGCTATGAGGACGGATAGTGCACTGAAGTTTGGTTGGTTTTTCATGTTCTACTTGCTTCATATTGCATTTTGCATATTTGCTGCAATCGCCCCTCCAGTTGTTTTTCATGGGAAATCATTGACGGGCATCCTTGCTGCAATTGATGTCTTCTCAGACCATGTATTGGTTGGGATTTTCTATTTGATTGGATTCGGGATGTTTTGCTTGGAGGCTCTTCTAAGCTTATGGGTACTCCAGGATTTTGATCCGACGGCTTTGATAGTGTTGTCACTTCCCAGTGTGGCTTAG 828 0.4227 MKCWVGFAEGKRRIVASSAVLSVFFVNREVPRLLTIQIPVICRGLNRARSPPVASEPLGYGQRHDATVDIPLDTTNDSKKKGQELAAWEADLKQREKNWPPLFPIIHHDIANEIPVHAQRLQYLAFASWLGIVLCLVFNVVAVIVCWIRGGGVKIFFLAVIYALMGVPLSYVLWYRPLYRAMRTDSALKFGWFFMFYLLHIAFCIFAAIAPPVVFHGKSLTGILAAIDVFSDHVLVGIFYLIGFGMFCLEALLSLWVLQDFDPTALIVLSLPSVA 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03411 275 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 55 260 IPR007273 GO:0015031|GO:0016020
Vimu7g03411 275 Pfam SCAMP family 96 259 IPR007273 GO:0015031|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03411 Vimu-Chr7 28766034 28770735 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03411 52 259 Miscellaneous Gene Families AT1G32050 72.687 1.40e-119 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03411 K19995 - gmx:100806586 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03411 7 28766034 28770735 Vimu7g03411 7 28766034 28770735 ECH