Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03400 ATGGGAAAGAGCAAGGTTCTTGTTGTGGGGGGAACTGGGTATGTGGGAAGGAGGATAGTGAAGGCAAGTCTAGAACAAGGGCATGAAACCTATGTTCTTCAACGTCCCGACATAGGGTTAGATATCGACAAGTTGCAGATGCTGCTTTCATTCAAGAAGCAAGGCGCTCATCTTGTGAAGGCTTCTTTTTCTGATCACCAGAGCTTGGTGGATGCTGTCAAACTTGTCGATGTTGTCATTTGCACCATGTCTGGAGTTCATTTTCGCTCTCACAACTTGTTGTTGCAGCTTCAACTTGTTGAGGCCATCAAAGTTGCAGGAAATGTCAAGCGTTTTCTGCCTTCAGAATTTGGCATGGACCCTTCACTTATGGGGCATGCACTTGAACCGGGAAGAGTGACATTCGATGAGAAAATGATTGTACGGAAAGCAATTGAAGATGCCAACATCCCTTTCACTTACATCTCTGCTAACTGCTTTGCTGGCTACTTTGTTGCTAACCTGTCTCAAATGGGGACCCTCCTCCCTCCACGAGACAAGGTCATTCTCTATGGTGATGGCAATGTCAAAGCTGTTTTCATGGATGAAGATGATGTTGCAACGTACGCAATCAAGACAATTGATGATCCTCGAACGCTGAACAAGACTGTATACCTAAGACCACCAGAAAACATTCTCACTCAAAGACAGCTAATTGAGAAGTGGGAGAAGCTCATAGGGAAGCAACTAGAGAAGTCCAGCATAAATGAACAAGATTTTCTTGCTTCCATGAAAGGTAACAGCACACCCAGAAGAGAAAGTTTGGACTATGCATCACAAGTGGGAGTGGGGCATTTCTACCATCTTTTCTATGAAGGGTGTTTGACAAACTTTGAAATAGGAGAAGGTGGAGAAGAAGCTTCAGCACTTTATCCAGAGGTGAATTACACTCGCATGGATGAATACCTTAAAGTCTATGTGTGA 963 0.4413 MGKSKVLVVGGTGYVGRRIVKASLEQGHETYVLQRPDIGLDIDKLQMLLSFKKQGAHLVKASFSDHQSLVDAVKLVDVVICTMSGVHFRSHNLLLQLQLVEAIKVAGNVKRFLPSEFGMDPSLMGHALEPGRVTFDEKMIVRKAIEDANIPFTYISANCFAGYFVANLSQMGTLLPPRDKVILYGDGNVKAVFMDEDDVATYAIKTIDDPRTLNKTVYLRPPENILTQRQLIEKWEKLIGKQLEKSSINEQDFLASMKGNSTPRRESLDYASQVGVGHFYHLFYEGCLTNFEIGEGGEEASALYPEVNYTRMDEYLKVYV 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03400 320 Pfam NmrA-like family 6 276 IPR008030 -
Vimu7g03400 320 Gene3D - 158 316 - -
Vimu7g03400 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 258 IPR036291 -
Vimu7g03400 320 CDD PCBER_SDR_a 5 315 IPR045312 GO:0016491
Vimu7g03400 320 PANTHER PINORESINOL REDUCTASE-RELATED 1 319 - -
Vimu7g03400 320 Gene3D - 4 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03400 Vimu-Chr7 28652833 28655523 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03400 K21568 - gmx:100775382 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03400 7 28652833 28655523 Vimu7g03400 7 28652833 28655523 ECH