Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03398 ATGGCAAAGAGCAAAGTTCTTATTGTTGGGGGAACTGGCTACATAGGGAAAAGGTTGGTGAAGGCAAGTTTGGCTCAAGGACACCAAACATTTGTCCTTCACAGACCAGAGATTGGTGTTGACATTGAGAAAGTTCAGCTTCTCTTGAAGTTCAAAGAACAAGGGGCAAGACTAGTGTCAGGTTCCTTTAATGATCATGAGAGCCTGGTGAATGCCGTGAAACTGGTTGATGTTGTCATCTGTGCCATATCTGGTGTTCATATCCGCAGCCACCAAATCCTCCTCCAACTTAAACTTGTTGATGCAATAAAAGAAGCTGGAAATGTCAAGAGATTTTTGCCTTCAGAGTTTGGGACCGATCCTGCTAGAATGGGACATGCATTGGAGCCTGGAAGAGTAACATTTGACGACAAAATGGTTGTAAGAAAAGCTATTGAAGAGGCTGGAATACCATTCACCTATATTTCTGCTAATTGTTTTGCCGGTTACTTTCTTGGTGGGTTATGTCAGCCCGGCTTTATAATGCCCCCAAGGGATTCTGTGGTGTTATTTGGAGATGGAAACGTAAAGGCTATCTATGTGGAAGAATATGATATAGCCATGTATACTATCAAAAGCATAGATGACCCCAGAACTCTGAACAAAACAGTTTACATTAGGCCACCAGAAAACATACTGTCCCAGAGAGAAGTTGTTCAAATTTGGGAGAAACTGATTGGGAAAGAGTTGCAGAAATCTTCAATTTCTGCAGAACAGCTTTTGAGTTCCATGGAAGGACAACCTTATGAACAGCAAGTAGGAATTGGACATTACTACCATGTTTGCTTTGAAGGCTGTCTCACAAATTTTGAGATTGGAGAAGAAGGGGTTGAAGCTTGTGAATTGTATCCTGAAATAAAGTACACTACTGTTGAAGACTACATGAAACGCTATGTATAG 939 0.4132 MAKSKVLIVGGTGYIGKRLVKASLAQGHQTFVLHRPEIGVDIEKVQLLLKFKEQGARLVSGSFNDHESLVNAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNVKRFLPSEFGTDPARMGHALEPGRVTFDDKMVVRKAIEEAGIPFTYISANCFAGYFLGGLCQPGFIMPPRDSVVLFGDGNVKAIYVEEYDIAMYTIKSIDDPRTLNKTVYIRPPENILSQREVVQIWEKLIGKELQKSSISAEQLLSSMEGQPYEQQVGIGHYYHVCFEGCLTNFEIGEEGVEACELYPEIKYTTVEDYMKRYV 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03398 312 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 257 IPR036291 -
Vimu7g03398 312 Gene3D - 158 308 - -
Vimu7g03398 312 PANTHER PINORESINOL REDUCTASE-RELATED 1 312 - -
Vimu7g03398 312 Pfam NmrA-like family 6 242 IPR008030 -
Vimu7g03398 312 CDD PCBER_SDR_a 5 307 IPR045312 GO:0016491
Vimu7g03398 312 Gene3D - 4 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03398 Vimu-Chr7 28645977 28648313 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03398 K21568 - gmx:100780465 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03398 7 28645977 28648313 Vimu7g03398 7 28645977 28648313 ECH