Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03394 ATGTCGTCGAAGGTTGTGTACGAAGGGTGGATGGTGCGGTACGGCCGGCGGAAGATCGGGAGATCGTTCATTCACATGAGGTACTTCGTGTTGGAGTCGCGGCTGCTAGCGTATTACAAGAGGAAACCGCAGGATAATCAGGTGGTTCTATTGCTTTTCTCTTTTCGTGTGTGTGGAATTTCTCTTCTTTGGTTTCTTTTGCGTTTCGGAGAATTAAGCCGATTGTTATTTCTTTTGCTTGAATTTGTTTTGCTTGTTGAAGTTTCCACTATCCGGAGTTACCTTTTGGGGTATTCTATGGTCCCAATTAAAACACTGCTAATTGACGGCAACTGCAGAGTGGAGGATAGAGGCTTGAAGACTCATCATGGACATGAGAAATCTCCTGATCATATGTATATTCTGATCATCAAGGAAGAGCTGCGATATAATCCTCTCCATTGTTGTCAATCTTATTCAAATCAAACCTTTCAAGCAGATTTGTGCACTAGAATGAGAGGTATATGTGTTCTCATGATGCACCAACCAGTAACCAATAACCAGATGGTTTATGTTTTGTCTGTTTACAACAAGAAAGAAAAGAACCATCGAATTATGATGGCAGCATTTAACATCCAAGAGGCCCTAATTTGGAAGGAAAAAATAGAGTATGTTATTGATCAGCACCAGGGAGCTCAACCATCAAATGGAAACAAATATATTTCTTTTGAGTACAAATCTGGGATGGACAATGGAAAGACAGCTTCTTCCTCAGATCGTGAAAGCCAGTTCAGTGCTCAGGAGGATGAAGATGATACTCATCCTAATTTGTTAAGAAGGACAACAATTGGAAATGGCCCTCCTGAATCAGTTTTTGACTGGACACGGGAAATAGATTCGGACTTGTCAAATCAAAATATCAACAACCAAGCATTCTCAAGAAAGCATTGGCGTCTTTTACAATGTCAAGATGGACTTCGTATTTTTGAAGAACTCGTTGAAGTTGATTACCTTCCAAGGAGTTGCAGTAGAGCTATGAAGGCAGTAGGTGTTGTGGAGGCGACTTGTGAAGAAATTTTTGAACTTGTGATGAGCATGGATGGGACACGGTTTGAATGGGATTGCAGTTTCCTACATGGTAGTTTAGTTGAGGAGGTGGATGGGCATACAGCAGTTCTTTATCATCGACTTCAGCTAGATTGGTTCCCAATGTTTGTGTGGCCCCGTGATCTTTGTTATGTACGATATTGGCGCCGAAATGATGATGGAAGTTATGTTGTTTTATTTCGCTCCAGGGAGCATGAAAACTGCAGTCCACAGCCAGGGTGTGTTCGAGCACATATTGAGAGTGGAGGATTTAATATTTCCCCCTTAAAACCTCGAAATGGAAGGCCGAGGACACAAGTCCAGCATCTTATGCAGATTGATCTGAAGGGATGGGGTGTAGGTTACCTGTCATCTTTTCAGCAGTATTGTGTCCGTCAAATGTTAAATAGTGTAGCTGGTTTACGTGAATGGTTTGCCCAATCAGATGAAAGAAACGCTCATCCAAGAATTCCTGTCATGGTTAACATGTCCTCAACATCTGTTTCTTCAAAGAAGAATCAGAAGCCAAATGATTTTTCTGTCAATCCTTCTTCTATTGATCAAATGAATTCTGCAAGCAGAAACTCTGCCTTGATAGATGAATATTCTGATGATGAAGAAGATTTTCAAATAGCAGAATCTGAGCAAGAGGCGTACCAAATTGGTCTTGAGAATGATGTGAAAAGAACAGCTTTGGAAGAAGAGCCTGCAAATGAAATCGACTTATCTTCCTTTTCGGGAAATTTGCGCCGGGATGACCGAGATAATGCTCGGGACTGCTGGAAAATTTCTGATGGAAATAACTTTAGAGTCAGAAGCAAGCATTTTTGTTATGACAAGTCGAAGGTTCCTGCTGGCAAGCATATGCTGGATCTTGTTGCTGTAGATTGGTTTAAGGACTCAAAAAGGATGGACCATGTGGCTAGGCGTCATGGCTGTGCAGCCCAAGTAGCTTCGGAAAAAGGATTTTTCTCCATTGTCATTAATCTTCAAGTGCCTGCATCAACACACTATAGTATGGTTTTTTATTTTGTGACGAAGGAGTTAGTTTCTGGATCCCTGTTGCATCGCTTTGTTGATGGTGATGATGAGTTTCGAAACAGCAGGTTTAAGCTTATACCATCAGTCCCTAAGGGTTCATGGATTGTACGCCAGAGTGTTGGGAGTACTCCTTGTTTGCTGGGAAAGGCAGTTGATTGCAACTACATTCGTGGTCCCAAGTATTTAGAAATTGATGTTGATATTGGTTCCTCTACTGTTGCCAATGGAGTTTTGGGGCTGGTTATTGGTGTTATTACAACATTGGTTGTAGATATGGCTTTTCTTGTACAGGCAAATACTCCTGATGAGTTGCCCGAGAGGCTTATTGGAGCTGTTCGTATTTCTCACTTAGAGCTTAAGTCTGCCATCGTCCCAAAACTGGAACAGGATATATCATGA 2505 0.4164 MSSKVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKRKPQDNQVVLLLFSFRVCGISLLWFLLRFGELSRLLFLLLEFVLLVEVSTIRSYLLGYSMVPIKTLLIDGNCRVEDRGLKTHHGHEKSPDHMYILIIKEELRYNPLHCCQSYSNQTFQADLCTRMRGICVLMMHQPVTNNQMVYVLSVYNKKEKNHRIMMAAFNIQEALIWKEKIEYVIDQHQGAQPSNGNKYISFEYKSGMDNGKTASSSDRESQFSAQEDEDDTHPNLLRRTTIGNGPPESVFDWTREIDSDLSNQNINNQAFSRKHWRLLQCQDGLRIFEELVEVDYLPRSCSRAMKAVGVVEATCEEIFELVMSMDGTRFEWDCSFLHGSLVEEVDGHTAVLYHRLQLDWFPMFVWPRDLCYVRYWRRNDDGSYVVLFRSREHENCSPQPGCVRAHIESGGFNISPLKPRNGRPRTQVQHLMQIDLKGWGVGYLSSFQQYCVRQMLNSVAGLREWFAQSDERNAHPRIPVMVNMSSTSVSSKKNQKPNDFSVNPSSIDQMNSASRNSALIDEYSDDEEDFQIAESEQEAYQIGLENDVKRTALEEEPANEIDLSSFSGNLRRDDRDNARDCWKISDGNNFRVRSKHFCYDKSKVPAGKHMLDLVAVDWFKDSKRMDHVARRHGCAAQVASEKGFFSIVINLQVPASTHYSMVFYFVTKELVSGSLLHRFVDGDDEFRNSRFKLIPSVPKGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEIDVDIGSSTVANGVLGLVIGVITTLVVDMAFLVQANTPDELPERLIGAVRISHLELKSAIVPKLEQDIS 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03394 834 CDD START 302 478 - -
Vimu7g03394 834 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 616 819 IPR009769 -
Vimu7g03394 834 SUPERFAMILY Bet v1-like 294 475 - -
Vimu7g03394 834 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 21 830 IPR045096 -
Vimu7g03394 834 ProSiteProfiles PH domain profile. 4 220 IPR001849 -
Vimu7g03394 834 SUPERFAMILY PH domain-like 2 222 - -
Vimu7g03394 834 Gene3D - 310 512 IPR023393 -
Vimu7g03394 834 ProSiteProfiles START domain profile. 310 492 IPR002913 GO:0008289
Vimu7g03394 834 MobiDBLite consensus disorder prediction 256 270 - -
Vimu7g03394 834 MobiDBLite consensus disorder prediction 244 278 - -
Vimu7g03394 834 MobiDBLite consensus disorder prediction 519 544 - -
Vimu7g03394 834 Pfam START domain 336 483 IPR002913 GO:0008289
Vimu7g03394 834 SMART START_1 290 502 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03394 Vimu-Chr7 28594907 28608466 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03394 - - gmx:100806401 1276.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03394 7 28594907 28608466 Vimu7g03394 7 28594907 28608466 ECH